RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 PIM3Q86V86 326 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 VRK3Q8IV63 474 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 RBM12BQ8IXT5 1001 aaKnown RBP11.89□□□□□ -0.51
DNMT1-218ENST00000589294 CPNE9Q8IYJ1 553 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 NAGSQ8N159 534 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 ARL10Q8N8L6 244 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 OR6C4Q8NGE1 309 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 ACMSDQ8TDX5 336 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 EPS8L3Q8TE67 593 aaKnown RBP11.89□□□□□ -0.51
DNMT1-218ENST00000589294 SETD7Q8WTS6 366 aaKnown RBP11.89□□□□□ -0.51
DNMT1-218ENST00000589294 ASB11Q8WXH4 323 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 TFGQ92734 400 aaPredicted RBP11.89□□□□□ -0.51
DNMT1-218ENST00000589294 CABS1Q96KC9 395 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 ZIM3Q96PE6 472 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 INSM2Q96T92 566 aaPredicted RBP11.89□□□□□ -0.51
DNMT1-218ENST00000589294 VIPAS39Q9H9C1 493 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 SNX15Q9NRS6 342 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 EVA1BQ9NVM1 165 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 SCHIP1Q9P0W5 487 aaPredicted RBP11.89□□□□□ -0.51
DNMT1-218ENST00000589294 CPNE7Q9UBL6 633 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 TBK1Q9UHD2 729 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 PSMD13Q9UNM6 376 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 TMEM131Q92545 1883 aa11.89□□□□□ -0.51
DNMT1-218ENST00000589294 A0A096LPK6 155 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 CCDC189A1A4V9 331 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 B4DGG1 531 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 GFYI3L273 518 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 SLC16A5O15375 505 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 SIGLEC6O43699 453 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 GDF9O60383 454 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 NOBOXO60393 691 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 RFPL1O75677 317 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 TSPAN12O95859 305 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 SLC35E2BP0CK96 405 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 CCDC166P0CW27 439 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 MTHFD1P11586 935 aaKnown RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 ZNF37AP17032 561 aaPredicted RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 KRT15P19012 456 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 SLC19A1P41440 591 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 FASLGP48023 281 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 DUSP3P51452 185 aaPredicted RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 ATP6V0D1P61421 351 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 KRT33BQ14525 404 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 C14orf28Q4W4Y0 310 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 TAF1BQ53T94 588 aaPredicted RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 CMC1Q7Z7K0 106 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 TBC1D1Q86TI0 1168 aaPredicted RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 LCA5Q86VQ0 697 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 RASGRP3Q8IV61 690 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 TBC1D21Q8IYX1 336 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 CYP4X1Q8N118 509 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 MYO1HQ8N1T3 1032 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 ARL14Q8N4G2 192 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 MAPK15Q8TD08 544 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 RHBDD1Q8TEB9 315 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 MZB1Q8WU39 189 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 SKA2Q8WVK7 121 aaPredicted RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 SH3KBP1Q96B97 665 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 CXorf40BQ96DE9 158 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 LINGO1Q96FE5 620 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 RMDN2Q96LZ7 410 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 C12orf66Q96MD2 445 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 CDC6Q99741 560 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 DERL2Q9GZP9 239 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 STN1Q9H668 368 aaKnown RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 MVB12BQ9H7P6 319 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 UCK1Q9HA47 277 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 SLC40A1Q9NP59 571 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 ZNF624Q9P2J8 865 aaPredicted RBP11.88□□□□□ -0.51
DNMT1-218ENST00000589294 POLG2Q9UHN1 485 aa11.88□□□□□ -0.51
DNMT1-218ENST00000589294 ARID1BQ8NFD5 2236 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 TRBV23OR9-2A0A075B6M9 112 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 SMIM23A6NLE4 172 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 OR52A4PA6NMU1 304 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PHGDHO43175 533 aaKnown RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 NUDT21O43809 227 aaKnown RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 ZBTB14O43829 449 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 LDOC1O95751 146 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 VIPP01282 170 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 C8GP07360 202 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 CKMT1AP12532 417 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PNLIPP16233 465 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 GLB1P16278 677 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 CCNFP41002 786 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PGGT1BP53609 377 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 UBE2IP63279 158 aaKnown RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 ZNF460Q14592 562 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 NR0B2Q15466 257 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 FAM83EQ2M2I3 478 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 KRT71Q3SY84 523 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PPM1JQ5JR12 505 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 CEP85LQ5SZL2 805 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-218ENST00000589294 TTC23LQ6PF05 361 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 PIP4P1Q86T03 277 aa11.87□□□□□ -0.51
DNMT1-218ENST00000589294 NAXDQ8IW45 347 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms