RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 ANAPC1Q9H1A4 1944 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 SCN8AQ9UQD0 1980 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 GLYATL1P3A0A0U1RQE8 302 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 C1orf232A0A0U1RR37 186 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 PRAMEF12O95522 483 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 THRBP10828 461 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 NFKBIAP25963 317 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 SPAM1P38567 509 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 DGKQP52824 942 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 CYP4F3Q08477 520 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 SELPLGQ14242 412 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 IMPG1Q17R60 797 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 DRAXINQ8NBI3 349 aaPredicted RBP19.45■□□□□ 0.7
MBD1-216ENST00000587605 GTF2H4Q92759 462 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 LRTM1Q9HBL6 345 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 KCTD5Q9NXV2 234 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.45■□□□□ 0.7
MBD1-216ENST00000587605 ZMYM5Q9UJ78 669 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 NEUROG3Q9Y4Z2 214 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 CROCCQ5TZA2 2017 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 ANKRD12Q6UB98 2062 aa19.45■□□□□ 0.7
MBD1-216ENST00000587605 PLXNA4Q9HCM2 1894 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 CXorf51AA0A1B0GTR3 108 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.44■□□□□ 0.7
MBD1-216ENST00000587605 UPK1AO00322 258 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 ALPLP05186 524 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 EPB42P16452 691 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 MYBPC3Q14896 1274 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 RBM48Q5RL73 367 aaKnown RBP19.44■□□□□ 0.7
MBD1-216ENST00000587605 TTC23Q5W5X9 447 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 ZNF773Q6PK81 442 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 Q6ZNB5 142 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 NECAB2Q7Z6G3 386 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 ZDHHC13Q8IUH4 622 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 ZNF548Q8NEK5 533 aaPredicted RBP19.44■□□□□ 0.7
MBD1-216ENST00000587605 RAET1EQ8TD07 263 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 USP7Q93009 1102 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 TMBIM1Q969X1 311 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 C12orf43Q96C57 262 aaKnown RBP19.44■□□□□ 0.7
MBD1-216ENST00000587605 IGSF21Q96ID5 467 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 PIF1Q9H611 641 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 CLMPQ9H6B4 373 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 ATP13A3Q9H7F0 1226 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 IL26Q9NPH9 171 aa19.44■□□□□ 0.7
MBD1-216ENST00000587605 MANBAO00462 879 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 GPR39O43194 453 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 NOL3O60936 208 aaKnown RBP19.43■□□□□ 0.7
MBD1-216ENST00000587605 TRIM16O95361 564 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 GUCA1CO95843 209 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 KRT6AP02538 564 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 KRT6BP04259 564 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 JUNBP17275 347 aaPredicted RBP19.43■□□□□ 0.7
MBD1-216ENST00000587605 IL1RNP18510 177 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 KRT6CP48668 564 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 CBX2Q14781 532 aaPredicted RBP19.43■□□□□ 0.7
MBD1-216ENST00000587605 CDKN3Q16667 212 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 ATG9BQ674R7 924 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 OFCC1Q8IZS5 231 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 LKAAEAR1Q8TD35 194 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 ULK4Q96C45 1275 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 APOL5Q9BWW9 433 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 MAGIXQ9H6Y5 334 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 POLR1BQ9H9Y6 1135 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 USE1Q9NZ43 259 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 VAPAQ9P0L0 249 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 GMEB1Q9Y692 573 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 ELOVL7A1L3X0 281 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 DFNA5O60443 496 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 RSL1D1O76021 490 aaKnown RBP19.43■□□□□ 0.7
MBD1-216ENST00000587605 CPNE6O95741 557 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 IGSF6O95976 241 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 RETP07949 1114 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 MTHFRP42898 656 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 GRSF1Q12849 480 aaKnown RBP eCLIP19.43■□□□□ 0.7
MBD1-216ENST00000587605 CLEC4FQ8N1N0 589 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 NXPE1Q8N323 547 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 TCAIMQ8N3R3 496 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 PAF1Q8N7H5 531 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 LYSMD1Q96S90 227 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 BOCQ9BWV1 1114 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 VN1R3Q9BXE9 311 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 PLGRKTQ9HBL7 147 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 HMX1Q9NP08 348 aaPredicted RBP19.43■□□□□ 0.7
MBD1-216ENST00000587605 C1orf109Q9NX04 203 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 IFT80Q9P2H3 777 aaPredicted RBP19.43■□□□□ 0.7
MBD1-216ENST00000587605 KLQ9UEF7 1012 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 ZNF490Q9ULM2 529 aaPredicted RBP19.43■□□□□ 0.7
MBD1-216ENST00000587605 PRSS21Q9Y6M0 314 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 V9GYQ6 96 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 KIAA1671Q9BY89 1806 aa19.43■□□□□ 0.7
MBD1-216ENST00000587605 ERN1O75460 977 aaKnown RBP19.42■□□□□ 0.7
MBD1-216ENST00000587605 STK16O75716 305 aa19.42■□□□□ 0.7
MBD1-216ENST00000587605 SOD2P04179 222 aa19.42■□□□□ 0.7
MBD1-216ENST00000587605 PGRP06401 933 aa19.42■□□□□ 0.7
MBD1-216ENST00000587605 BPIP17213 487 aa19.42■□□□□ 0.7
MBD1-216ENST00000587605 ITGB6P18564 788 aa19.42■□□□□ 0.7
MBD1-216ENST00000587605 RPL10P27635 214 aaKnown RBP19.42■□□□□ 0.7
MBD1-216ENST00000587605 HNRNPFP52597 415 aaKnown RBP19.42■□□□□ 0.7
MBD1-216ENST00000587605 TUBA3CQ13748 450 aa19.42■□□□□ 0.7
MBD1-216ENST00000587605 RAB39AQ14964 217 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms