RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 ZNF252P-AS1Q0IIN9 211 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CDH17Q12864 832 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SLAMF1Q13291 335 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ERV3-1Q14264 604 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CA9Q16790 459 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 INTS11Q5TA45 600 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PNCKQ6P2M8 343 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TFAP2EQ6VUC0 442 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TIGD4Q8IY51 512 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 OR8H3Q8N146 312 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ATG16L2Q8NAA4 619 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 DNAJA4Q8WW22 397 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SLCO4A1Q96BD0 722 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RNF208Q9H0X6 261 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZDHHC4Q9NPG8 344 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 NUFIP1Q9UHK0 495 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SLC6A14Q9UN76 642 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SHOC2Q9UQ13 582 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MEIOCA2RUB1 952 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TMEM191CA6NGB0 347 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 AGAP5A6NIR3 686 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZBTB24O43167 697 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 EIF1BO60739 113 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 URODP06132 367 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ALDH4A1P30038 563 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SLC7A1P30825 629 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CAPGP40121 348 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 EIF1P41567 113 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 KPNA2P52292 529 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 YWHAEP62258 255 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 DYNLT1P63172 113 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ADAM15Q13444 863 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 KCNC3Q14003 757 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 GRB7Q14451 532 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MSS51Q4VC12 460 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SETMARQ53H47 684 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TFDP3Q5H9I0 405 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 STRA8Q7Z7C7 330 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PGAM4Q8N0Y7 254 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MPP5Q8N3R9 675 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 DHRSXQ8N5I4 330 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MCFD2Q8NI22 146 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZNF606Q8WXB4 792 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FUBP1Q96AE4 644 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 VPS39Q96JC1 886 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 LENG8Q96PV6 779 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CGRRF1Q99675 332 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 NPAS1Q99742 590 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SLIRPQ9GZT3 109 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 NMUR1Q9HB89 426 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RPS6KA6Q9UK32 745 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ST3GAL5Q9UNP4 418 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZFR2Q9UPR6 939 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
CDK5RAP3-232ENST00000584168 hCG_1818297A0A087WSY0 165 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ARGFXA6NJG6 315 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CYB561D2O14569 222 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 HCRTO43612 131 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CHRM5P08912 532 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 VAMP1P23763 118 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CCT3P49368 545 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RNF4P78317 190 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 OGDHQ02218 1023 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PLCL1Q15111 1095 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FNBP1LQ5T0N5 605 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ANGPTL8Q6UXH0 198 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZCCHC23Q6ZST2 131 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 C1orf127Q8N9H9 656 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 OR7G3Q8NG95 312 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RNF34Q969K3 372 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PTERQ96BW5 349 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 KIF12Q96FN5 646 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CNDP1Q96KN2 507 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 NECTIN4Q96NY8 510 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SPATA9Q9BWV2 254 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FAM96AQ9H5X1 160 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ESRP2Q9H6T0 727 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PCDH9Q9HC56 1237 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 HSPB11Q9Y547 144 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PQLC2LA1A4F0 135 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PIPSLA2A3N6 862 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MTMR11A4FU01 709 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZBTB14O43829 449 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TIPRLO75663 272 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 HTR3BO95264 441 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ITGAVP06756 1048 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TRHRP34981 398 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RAB13P51153 203 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 LSM3P62310 102 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 GABREP78334 506 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MRPS5P82675 430 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZC3H12BQ5HYM0 836 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TEDDM1Q5T9Z0 273 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ANKRD22Q5VYY1 191 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RETREG3Q86VR2 466 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TCTE3Q8IZS6 198 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FAM156AQ8NDB6 213 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ASZ1Q8WWH4 475 aa11.69□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MUL1Q969V5 352 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms