RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-218	ENST00000580745	TLK1	Q9UKI8	766 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	POMT2	Q9UKY4	750 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	POLH	Q9Y253	713 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PCDHGA6	Q9Y5G7	932 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	COLEC10	Q9Y6Z7	277 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FLNB	O75369	2602 aa	Known RBP	10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CCDC162P	A2VCL2	907 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745		H7C0S8	307 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	OR1I1	O60431	355 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CPNE3	O75131	537 aa	Known RBP	10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	AP2A1	O95782	977 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MT-ND3	P03897	115 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CTSB	P07858	339 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	NDUFS1	P28331	727 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PRDX3	P30048	256 aa	Known RBP	10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CASR	P41180	1078 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CACNG1	Q06432	222 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KIF5A	Q12840	1032 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PRKAA1	Q13131	559 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	LAMB3	Q13751	1172 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	GPR33	Q49SQ1	333 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZNF789	Q5FWF6	425 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PLEKHS1	Q5SXH7	462 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KMT5C	Q86Y97	462 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	GLIS1	Q8NBF1	620 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TTC13	Q8NBP0	860 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ACVR1C	Q8NER5	493 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	OR5AR1	Q8NGP9	310 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZFPM2	Q8WW38	1151 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	C1orf54	Q8WWF1	131 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TFG	Q92734	400 aa	Predicted RBP	10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	HES6	Q96HZ4	224 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CALR3	Q96L12	384 aa	Known RBP	10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZNF778	Q96MU6	729 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ETNK1	Q9HBU6	452 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PLAGL1	Q9UM63	463 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PLAA	Q9Y263	795 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	BTRC	Q9Y297	605 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MAN2B2	Q9Y2E5	1009 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	BOD1L1	Q8NFC6	3051 aa		10.8	□□□□□ -0.68
PPP4R1-218	ENST00000580745	C17orf113	A0A1B0GUU1	675 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MROH6	A6NGR9	719 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ARGFX	A6NJG6	315 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MIF4GD	A9UHW6	222 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	C21orf140	B9A014	251 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TMEM150C	B9EJG8	249 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	IFRD1	O00458	451 aa	Predicted RBP	10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	HCRTR1	O43613	425 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	IFNB1	P01574	187 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TPBGL	P0DKB5	382 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MSN	P26038	577 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PTPN4	P29074	926 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FOXN2	P32314	431 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PMS2	P54278	862 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CSE1L	P55060	971 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MLLT10	P55197	1068 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FOXK1	P85037	733 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SNX1	Q13596	522 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	BOP1	Q14137	746 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	DEFB110	Q30KQ9	67 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PTCHD3	Q3KNS1	767 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TMTC4	Q5T4D3	741 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	AMIGO1	Q86WK6	493 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TMEM151B	Q8IW70	566 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FAM20C	Q8IXL6	584 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ADGRF3	Q8IZF5	1079 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SYCE1	Q8N0S2	351 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	STYX	Q8WUJ0	223 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	HEXDC	Q8WVB3	486 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FCRL4	Q96PJ5	515 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PPP1R2P1	Q96PQ5	205 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TRAPPC9	Q96Q05	1148 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FAM60A	Q9NP50	221 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	C1GALT1	Q9NS00	363 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SPHK1	Q9NYA1	384 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ACTR10	Q9NZ32	417 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	IMPACT	Q9P2X3	320 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CIDEB	Q9UHD4	219 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ANAPC2	Q9UJX6	822 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ICK	Q9UPZ9	632 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FARSA	Q9Y285	508 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	HEBP2	Q9Y5Z4	205 aa		10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZFC3H1	O60293	1989 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ASH1L	Q9NR48	2969 aa	Known RBP	10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SETX	Q7Z333	2677 aa	Known RBP	10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KLHL33	A6NCF5	533 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MKRN2OS	H3BPM6	223 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MEN1	O00255	615 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	LIAS	O43766	372 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	RFPL1	O75677	317 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	GOT2	P00505	430 aa	Known RBP	10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CAPN1	P07384	714 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZSCAN5DP	P0CG00	497 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	RORA	P35398	523 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FOXL2	P58012	376 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SEMA5A	Q13591	1074 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SEMA3A	Q14563	771 aa		10.78	□□□□□ -0.68
PPP4R1-218	ENST00000580745	OASL	Q15646	514 aa	Known RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms