RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 MMP13P45452 471 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 KRT85P78386 507 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 FAM182AQ5T1J6 154 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 RFX8Q6ZV50 586 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 NDUFAF2Q8N183 169 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 DTWD1Q8N5C7 304 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 METTL27Q8N6F8 245 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 CCDC110Q8TBZ0 833 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 NELFBQ8WX92 580 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 C12orf66Q96MD2 445 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 AP1M1Q9BXS5 423 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 TMPRSS11EQ9UL52 423 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 AP4E1Q9UPM8 1137 aa13.53□□□□□ -0.24
CSNK1D-213ENST00000580446 INTS1Q8N201 2190 aaKnown RBP13.52□□□□□ -0.24
CSNK1D-213ENST00000580446 HIVEP2P31629 2446 aa13.52□□□□□ -0.24
CSNK1D-213ENST00000580446 FAM237BA0A1B0GVD1 139 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 H3BMH7 237 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 BTN3A3O00478 584 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 PRAMEF1O95521 474 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 LSM8O95777 96 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 HOXD4P09016 255 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 PRDX3P30048 256 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 ARSEP51690 589 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 PPP2R2BQ00005 443 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 PRKAA1Q13131 559 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 ZIC1Q15915 447 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 PPP6R3Q5H9R7 873 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 HIBCHQ6NVY1 386 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 GBP6Q6ZN66 633 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 FGD2Q7Z6J4 655 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 CHERPQ8IWX8 916 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 RPRMLQ8N4K4 120 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 PHF10Q8WUB8 498 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 ZNF599Q96NL3 588 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 SPSB2Q99619 263 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 TTLL3Q9Y4R7 772 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 NUP210LQ5VU65 1888 aa13.52□□□□□ -0.25
CSNK1D-213ENST00000580446 E9PLN8 166 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 H7C1Q1 480 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 BTN3A1O00481 513 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 ZSCAN9O15535 394 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 POP7O75817 140 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 TPOP07202 933 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 VCLP18206 1134 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 MMP8P22894 467 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 HOXC12P31275 282 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 HSPA9P38646 679 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 CTSCP53634 463 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 NKG7Q16617 165 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 EXOC3L4Q17RC7 722 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 DEFB113Q30KQ7 82 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 TFDP3Q5H9I0 405 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 CDC20BQ86Y33 519 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 PROKR1Q8TCW9 393 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 TEKT4Q8WW24 435 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 ZFPM2Q8WW38 1151 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 HAS2Q92819 552 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 PEBP4Q96S96 227 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 VKORC1Q9BQB6 163 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 NUP85Q9BW27 656 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 VPS16Q9H269 839 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 XKR8Q9H6D3 395 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 SYTL2Q9HCH5 934 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 KLHL1Q9NR64 748 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 ETNK2Q9NVF9 386 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 SHOC2Q9UQ13 582 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 RNF6Q9Y252 685 aa13.51□□□□□ -0.25
CSNK1D-213ENST00000580446 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 GPR39O43194 453 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 MAFKO60675 156 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 MT-CYBP00156 380 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 PRR35P0CG20 571 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 RPL7AP62424 266 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 ALDH6A1Q02252 535 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 QPCTQ16769 361 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 ANKRD20A8PQ5CZ79 823 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 COX15Q7KZN9 410 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 CARFQ8N187 725 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 BEND7Q8N7W2 519 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 GDAP1Q8TB36 358 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 LRRN4Q8WUT4 740 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 FAM81BQ96LP2 452 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 MCEEQ96PE7 176 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 SELENOOQ9BVL4 669 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 TDRD1Q9BXT4 1180 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 KIR3DX1Q9H7L2 352 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 KCNJ16Q9NPI9 418 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 PCSK1NQ9UHG2 260 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 CFAP45Q9UL16 551 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 MRPS2Q9Y399 296 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 HRH3Q9Y5N1 445 aa13.5□□□□□ -0.25
CSNK1D-213ENST00000580446 OR2AG2A6NM03 316 aa13.49□□□□□ -0.25
CSNK1D-213ENST00000580446 GPR89AB7ZAQ6 455 aa13.49□□□□□ -0.25
CSNK1D-213ENST00000580446 ATE1O95260 518 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms