RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 NEU2Q9Y3R4 380 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 AP1M2Q9Y6Q5 423 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 TMEM191CA6NGB0 347 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 LRRC53A6NM62 1247 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 MATN3O15232 486 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 MAP3K7O43318 606 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 POP7O75817 140 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 UNC5CO95185 931 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 CLDN14O95500 239 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 MMP2P08253 660 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 POLR2CP19387 275 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 LMAN1P49257 510 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 SMSP52788 366 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 FOXL2P58012 376 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 Q0VFX4 171 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 GALNT2Q10471 571 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 PRKAA1Q13131 559 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 XRCC4Q13426 336 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 TRIM14Q14142 442 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 NFE2L1Q14494 772 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 CDSNQ15517 529 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 METRNLQ641Q3 311 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 SARM1Q6SZW1 724 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 ISLR2Q6UXK2 745 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 GPR135Q8IZ08 494 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 CATSPER1Q8NEC5 780 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 BRSK1Q8TDC3 778 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 INSM2Q96T92 566 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 RBM22Q9NW64 420 aaKnown RBP eCLIP13.39□□□□□ -0.271e-8■■■■□ 20.2
CSNK1D-211ENST00000579316 ABI3Q9P2A4 366 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 CDYLQ9Y232 598 aa13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 CFAP20Q9Y6A4 193 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 DNMT3AQ9Y6K1 912 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 PRRC2AP48634 2157 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-211ENST00000579316 SOCS6O14544 535 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 FANCGO15287 622 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 ALOX12BO75342 701 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 HLA-DQB2P05538 268 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 IL1R2P27930 398 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 PRDX3P30048 256 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 PCK1P35558 622 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 CTSCP53634 463 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 C1orf189Q5VU69 101 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 ACAD10Q6JQN1 1059 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 TIGD7Q6NT04 549 aaPredicted RBP13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 CDHR3Q6ZTQ4 885 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 TGIF2LYQ8IUE0 185 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 OR1N1Q8NGS0 311 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 MAGEB10Q96LZ2 347 aaPredicted RBP13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 TRIB3Q96RU7 358 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 AGPAT1Q99943 283 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 TRIM7Q9C029 511 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 RBSNQ9H1K0 784 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 CXXC4Q9H2H0 198 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 MAGEE1Q9HCI5 957 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 LUC7L2Q9Y383 392 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
CSNK1D-211ENST00000579316 STAB1Q9NY15 2570 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 GSAPA4D1B5 854 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 NDUFS1P28331 727 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 TNFSF10P50591 281 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 ZBED6P86452 979 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 NKAIN1Q4KMZ8 207 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 ATP13A5Q4VNC0 1218 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 BOLA3Q53S33 107 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 PPP1R2P3Q6NXS1 205 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 BEND7Q8N7W2 519 aaPredicted RBP13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 RASGEF1AQ8N9B8 481 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 OR4E2Q8NGC2 313 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 DTX3LQ8TDB6 740 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 TSGA13Q96PP4 275 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 ZCCHC2Q9C0B9 1178 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 CHRNA10Q9GZZ6 450 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 WWP1Q9H0M0 922 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 SEC14L3Q9UDX4 400 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 CAPN11Q9UMQ6 739 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 ZNF711Q9Y462 761 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 HS3ST3B1Q9Y662 390 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 CSPG4Q6UVK1 2322 aa13.37□□□□□ -0.27
CSNK1D-211ENST00000579316 TRAV17A0A0B4J275 112 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 TMEM200CA6NKL6 621 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 OR2B3O76000 313 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 CCNCP24863 283 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 MST1P26927 711 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 CD86P42081 329 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 GABRA4P48169 554 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 CASP6P55212 293 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 RBPJQ06330 500 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 KIRREL2Q6UWL6 708 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 LINC00696Q6ZRV3 163 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 VSTM4Q8IW00 320 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 DNAJB8Q8NHS0 232 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms