RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 DACH2Q96NX9 599 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 NR1H4Q96RI1 486 aaPredicted RBP4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 MYOCQ99972 504 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 SLX1AQ9BQ83 275 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 CRACR2AQ9BSW2 395 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 SPXQ9BT56 116 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 C1orf43Q9BWL3 253 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 YIPF2Q9BWQ6 316 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 POPDC2Q9HBU9 364 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 FZD3Q9NPG1 666 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 SIRT3Q9NTG7 399 aaPredicted RBP4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 PIGVQ9NUD9 493 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 DDIT4Q9NX09 232 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 KCTD5Q9NXV2 234 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 KCMF1Q9P0J7 381 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 COX16Q9P0S2 106 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 EXTL2Q9UBQ6 330 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 SUN2Q9UH99 717 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 HOOK1Q9UJC3 728 aaKnown RBP4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 KIAA1257Q9ULG3 409 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 VANGL2Q9ULK5 521 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 SCML1Q9UN30 329 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 ATP6V1DQ9Y5K8 247 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 CAPN6Q9Y6Q1 641 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 U3KQA8 63 aa4.84□□□□□ -1.63
GAPLINC-202ENST00000579007 PTPN13Q12923 2485 aa4.84□□□□□ -1.64
GAPLINC-202ENST00000579007 FLNCQ14315 2725 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 TLN1Q9Y490 2541 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SDK2Q58EX2 2172 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 ARHGAP10A1A4S6 786 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 KRT87PA6NCN2 255 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 FAM90A20PA6NIJ5 464 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 LRRC72A6NJI9 287 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 H0YAE9 185 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 K7ERQ8 282 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 CASC3O15234 703 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SART1O43290 800 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SMAD6O43541 496 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 ZNF821O75541 412 aaPredicted RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SMC2O95347 1197 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 WISP1O95388 367 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 ADCY5O95622 1261 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 IL1BP01584 269 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SRCP12931 536 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 C6P13671 934 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 PRLRP16471 622 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 GOT1P17174 413 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 RAB6AP20340 208 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SAT1P21673 171 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 RFC1P35251 1148 aaPredicted RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 GGT5P36269 586 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 GARSP41250 739 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 ABCG1P45844 678 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 ACADSBP45954 432 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 CAPZA2P47755 286 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 PLK1P53350 603 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 C21orf59P57076 290 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 CTXN1P60606 82 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 INSM1Q01101 510 aaPredicted RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 MGAT5Q09328 741 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 KLHL30Q0D2K2 578 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 TBL3Q12788 808 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 MRPL28Q13084 256 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 NTRK2Q16620 822 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 TYSND1Q2T9J0 566 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SMU1Q2TAY7 513 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 MST1LQ2TV78 715 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 RAB6CQ53S08 254 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 TOR1AIP1Q5JTV8 583 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 C9orf152Q5JTZ5 239 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 TPRG1LQ5T0D9 272 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SEL1L3Q68CR1 1132 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 C22orf39Q6P5X5 142 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SEZ6L2Q6UXD5 910 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 Q6ZVL8 140 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 ACAD11Q709F0 780 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 FAM214BQ7L5A3 538 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SLC26A9Q7LBE3 791 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 BNIPLQ7Z465 357 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 TMPRSS12Q86WS5 348 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 ERICH1Q86X53 443 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 RHOT2Q8IXI1 618 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 RBM12BQ8IXT5 1001 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 MPP5Q8N3R9 675 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 GABPB2Q8TAK5 448 aaPredicted RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 CCHCR1Q8TD31 782 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 GANCQ8TET4 914 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 RPRD1AQ96P16 312 aaPredicted RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 OMDQ99983 421 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 DUSP23Q9BVJ7 150 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 BRD8Q9H0E9 1235 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 RAB6CQ9H0N0 254 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SLC25A18Q9H1K4 315 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 SEMA6CQ9H3T2 930 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 THAP9Q9H5L6 903 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 LIN28AQ9H9Z2 209 aaKnown RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 BCO1Q9HAY6 547 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 UBE2TQ9NPD8 197 aaPredicted RBP4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 PFDN4Q9NQP4 134 aa4.83□□□□□ -1.64
GAPLINC-202ENST00000579007 GDF3Q9NR23 364 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms