RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ARL15Q9NXU5 204 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 ZDHHC2Q9UIJ5 367 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 DMTF1Q9Y222 760 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 LRRC14BA6NHZ5 514 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 MATN2O00339 956 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 TOR1BO14657 336 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 MLYCDO95822 493 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 CEACAM5P06731 702 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 MAP4P27816 1152 aaKnown RBP18.15■□□□□ 0.5
PRKCA-203ENST00000578063 HNMTP50135 292 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 CDH13P55290 713 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 NFE2L1Q14494 772 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 SH2D4BQ5SQS7 431 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 TTC23LQ6PF05 361 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 RPS27LQ71UM5 84 aaKnown RBP18.15■□□□□ 0.5
PRKCA-203ENST00000578063 CAMKK1Q8N5S9 505 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 AGR3Q8TD06 166 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 ZNHIT2Q9UHR6 403 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 EIF2B4Q9UI10 523 aaKnown RBP18.15■□□□□ 0.5
PRKCA-203ENST00000578063 PRKAB1Q9Y478 270 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 PCYT1BQ9Y5K3 369 aaPredicted RBP18.15■□□□□ 0.5
PRKCA-203ENST00000578063 HS3ST3A1Q9Y663 406 aa18.15■□□□□ 0.5
PRKCA-203ENST00000578063 POM121BA6NF01 834 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 E2F3O00716 465 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 HDAC3O15379 428 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 KCNJ13O60928 360 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 IGHV4-34P06331 123 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 PDHA2P29803 388 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 DMPKQ09013 629 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 ABRQ12979 859 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 IFT88Q13099 833 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 NFATC4Q14934 902 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 XKR5Q6UX68 686 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 TRPM8Q7Z2W7 1104 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 GALNT13Q8IUC8 556 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 OR56A4Q8NGH8 313 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 NSUN5Q96P11 429 aaKnown RBP18.14■□□□□ 0.49
PRKCA-203ENST00000578063 TIMM29Q9BSF4 260 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 TPSD1Q9BZJ3 242 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 SHCBP1LQ9BZQ2 653 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 STK38LQ9Y2H1 464 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 SIT1Q9Y3P8 196 aa18.14■□□□□ 0.49
PRKCA-203ENST00000578063 IGHV1OR15-9A0A0B4J2B8 117 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 ARHGEF33A8MVX0 844 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 PRAMEF26H0Y7S4 382 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 UBFD1O14562 309 aaKnown RBP18.13■□□□□ 0.49
PRKCA-203ENST00000578063 ZNF195O14628 629 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 FSBPO95073 299 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 HTR1BP28222 390 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 CLDN2P57739 230 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 PFN3P60673 137 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 YPEL5P62699 121 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 FBXO48Q5FWF7 155 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 GCNT7Q6ZNI0 430 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 MAVSQ7Z434 540 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 TMEM145Q8NBT3 493 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 FBXO15Q8NCQ5 510 aaPredicted RBP18.13■□□□□ 0.49
PRKCA-203ENST00000578063 TRPC4APQ8TEL6 797 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 STON2Q8WXE9 905 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 SCARF2Q96GP6 870 aaPredicted RBP18.13■□□□□ 0.49
PRKCA-203ENST00000578063 TMEM79Q9BSE2 394 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 GPR174Q9BXC1 333 aa18.13■□□□□ 0.49
PRKCA-203ENST00000578063 APOBEC2Q9Y235 224 aaKnown RBP18.13■□□□□ 0.49
PRKCA-203ENST00000578063 CCT8L1PA6NM43 557 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 TAPBPO15533 448 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 GGT5P36269 586 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 MAGEA9P43362 315 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 MTAPQ13126 283 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 FAM83HQ6ZRV2 1179 aaPredicted RBP18.12■□□□□ 0.49
PRKCA-203ENST00000578063 CFAP61Q8NHU2 1237 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 AGAP11Q8TF27 550 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 BMFQ96LC9 184 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 WDR92Q96MX6 357 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 HGH1Q9BTY7 390 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 CD244Q9BZW8 370 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 OR52A5Q9H2C5 316 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 MID1IP1Q9NPA3 183 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 SEMA4BQ9NPR2 832 aaPredicted RBP18.12■□□□□ 0.49
PRKCA-203ENST00000578063 OPTCQ9UBM4 332 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 SLC23A2Q9UGH3 650 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 ASB1Q9Y576 335 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 GIPC1O14908 333 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 FGF4P08620 206 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 TSPAN8P19075 237 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 PIK3CGP48736 1102 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 HSPA7P48741 367 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 ZXDAP98168 799 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 PYCR3Q53H96 274 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 METRNLQ641Q3 311 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 EPGNQ6UW88 154 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 UNC5DQ6UXZ4 953 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 MBOAT1Q6ZNC8 495 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 PDZD3Q86UT5 571 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 ATL1Q8WXF7 558 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 ESAMQ96AP7 390 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 BIRC7Q96CA5 298 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 FBXL8Q96CD0 374 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 LRRC37BQ96QE4 947 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 ZNF382Q96SR6 550 aa18.12■□□□□ 0.49
PRKCA-203ENST00000578063 PCED1AQ9H1Q7 454 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms