RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 RPS15P62841 145 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 CDH17Q12864 832 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 GSE1Q14687 1217 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 OASLQ15646 514 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 UGT8Q16880 541 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 DEFB109BQ30KR1 87 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 LACTB2Q53H82 288 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 C4orf22Q6V702 233 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 ZNF662Q6ZS27 426 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 HPS6Q86YV9 775 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 LCN9Q8WX39 176 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 CPT1BQ92523 772 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 ABHD17AQ96GS6 310 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 SRMSQ9H3Y6 488 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 POLG2Q9UHN1 485 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 PCDHGB7Q9Y5F8 929 aa14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 PCDHGA9Q9Y5G4 932 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 SPTBN1Q01082 2364 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-213ENST00000578044 SNRNP200O75643 2136 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 USP9YO00507 2555 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 USP9XQ93008 2570 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 HEATR9A2RTY3 570 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 AP3B1O00203 1094 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 KDM1AO60341 852 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 RFPL1O75677 317 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 TIAF1O95411 115 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 GAS8O95995 478 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 KLK3P07288 261 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 HBQ1P09105 142 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 EBLN1P0CF75 366 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 PRKAR1AP10644 381 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 ACADLP28330 430 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 PBLDP30039 288 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 PRDX3P30048 256 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 PPARGP37231 505 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 OLIG2Q13516 323 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 KRT33BQ14525 404 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 PAPD7Q5XG87 772 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 AADACL2Q6P093 401 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 DRICH1Q6PGQ1 229 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 CT55Q8WUE5 264 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 TFGQ92734 400 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 ALS2CR12Q96Q35 445 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 C17orf62Q9BQA9 187 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 TMEM121Q9BTD3 319 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 MLXIPLQ9NP71 852 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 ENAMQ9NRM1 1142 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 OR6C2Q9NZP2 312 aa14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 CFAP20Q9Y6A4 193 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 SPTAN1Q13813 2472 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-213ENST00000578044 FER1L5A0AVI2 2057 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 C2orf74A8MZ97 194 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 LIASO43766 372 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 KRT86O43790 486 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 SCRG1O75711 98 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 POLBP06746 335 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 CD63P08962 238 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 SHMT2P34897 504 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 RORAP35398 523 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 GDF10P55107 478 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 TLE1Q04724 770 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 KLRB1Q12918 225 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 SEMA5AQ13591 1074 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 DBN1Q16643 649 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 ZRANB3Q5FWF4 1079 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 ZNF789Q5FWF6 425 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 AMIGO1Q86WK6 493 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 PIANPQ8IYJ0 282 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 TBC1D21Q8IYX1 336 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 OR4E2Q8NGC2 313 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 FAM118BQ9BPY3 351 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 DHRS4Q9BTZ2 278 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 NLNQ9BYT8 704 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 ACTL8Q9H568 366 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 SERTAD3Q9UJW9 196 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 FARSAQ9Y285 508 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 R3HDM2Q9Y2K5 976 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 AP1M2Q9Y6Q5 423 aa14.07□□□□□ -0.16
SMARCE1-213ENST00000578044 SLC5A10A0PJK1 596 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 PIPSLA2A3N6 862 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 GOLGA6L6A8MZA4 724 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 MEN1O00255 615 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 OR56A5P0C7T3 313 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 CDH3P22223 829 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 ADRA1DP25100 572 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 MSNP26038 577 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 FOXN2P32314 431 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 CD97P48960 835 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 FOXK1P85037 733 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 ERV3-1Q14264 604 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 SPARCL1Q14515 664 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 KCNAB1Q14722 419 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 POU6F1Q14863 301 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 PLEKHS1Q5SXH7 462 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 C16orf46Q6P387 395 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 AFTPHQ6ULP2 937 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 TMEM126BQ8IUX1 230 aa14.06□□□□□ -0.16
SMARCE1-213ENST00000578044 ADGRF3Q8IZF5 1079 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms