RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TMEM125Q96AQ2 219 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 TBL1YQ9BQ87 522 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 FBXO8Q9NRD0 319 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 SLAMF8Q9P0V8 285 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 TRHDEQ9UKU6 1024 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 AAR2Q9Y312 384 aaKnown RBP9.43□□□□□ -0.9
CCDC40-212ENST00000574799 RGS13O14921 159 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 EPN2O95208 641 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 NDST3O95803 873 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 RRM2P31350 389 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 SNRPD2P62316 118 aaKnown RBP9.43□□□□□ -0.9
CCDC40-212ENST00000574799 PPP2R2BQ00005 443 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 RAPSNQ13702 412 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 ACOX1Q15067 660 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 NR6A1Q15406 480 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 PAGE3Q5JUK9 113 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 LARP4Q71RC2 724 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCDC40-212ENST00000574799 CRYBG2Q8N1P7 616 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 C2orf69Q8N8R5 385 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 GALNT6Q8NCL4 622 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 OR10A6Q8NH74 314 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 RTP3Q9BQQ7 232 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 ZSCAN5AQ9BUG6 496 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 C1QTNF1Q9BXJ1 281 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 CCNB1IP1Q9NPC3 277 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 CASS4Q9NQ75 786 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 RGS18Q9NS28 235 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 DDIT4Q9NX09 232 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 PCDH10Q9P2E7 1040 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 RNF112Q9ULX5 631 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 PEX16Q9Y5Y5 336 aa9.43□□□□□ -0.9
CCDC40-212ENST00000574799 COL4A6Q14031 1691 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 GABRDO14764 452 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 STX7O15400 261 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 C1RP00736 705 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 MYL3P08590 195 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 MSH3P20585 1137 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 HNF4AP41235 474 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 SLC9A3P48764 834 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 HUNKP57058 714 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CTU2Q2VPK5 515 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 TSTD2Q5T7W7 516 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 TWF2Q6IBS0 349 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 GET4Q7L5D6 327 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 NECAB2Q7Z6G3 386 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 AMIGO1Q86WK6 493 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 GRAMD2AQ8IUY3 354 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 ATPAF2Q8N5M1 289 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CAMKK1Q8N5S9 505 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 LRRC52Q8N7C0 313 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 ST13P5Q8NFI4 369 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 TRNT1Q96Q11 434 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 ACAT2Q9BWD1 397 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 MKRN2Q9H000 416 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 VWA7Q9Y334 891 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 PCDHGB6Q9Y5F9 930 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 DNAJC15Q9Y5T4 150 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 LRRC14BA6NHZ5 514 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 RRN3P2A6NIE6 340 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 PPP6CO00743 305 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 PSMD3O43242 534 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 B4GALT3O60512 393 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 MITFO75030 526 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 ADAMTS4O75173 837 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CNTN5O94779 1100 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CSF2P04141 144 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 IMPDH1P20839 514 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 UQCRC1P31930 480 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 IDH2P48735 452 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 ZNF45Q02386 682 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CDK5R2Q13319 367 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 RFX4Q33E94 735 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 BCL7AQ4VC05 210 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 ANKS6Q68DC2 871 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 USP51Q70EK9 711 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 GDPD3Q7L5L3 318 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CTU1Q7Z7A3 348 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 FBXO39Q8N4B4 442 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 PARP16Q8N5Y8 322 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 SLC43A3Q8NBI5 491 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 NT5C3BQ969T7 300 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 FKBP10Q96AY3 582 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 MTERF3Q96E29 417 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 FAM124BQ9H5Z6 455 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 SARS2Q9NP81 518 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 DYRK4Q9NR20 520 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 NUFIP1Q9UHK0 495 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 Q9Y3F1 56 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 PCDHGA10Q9Y5H3 936 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 MAU2Q9Y6X3 613 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 DNAH14Q0VDD8 3507 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 RANBP2P49792 3224 aaKnown RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 TTC24A2A3L6 582 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-212ENST00000574799 ANXA9O76027 345 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CYP2B6P20813 491 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CTSKP43235 329 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 LILRA4P59901 499 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 DNAJB13P59910 316 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CDC20Q12834 499 aa9.42□□□□□ -0.9
CCDC40-212ENST00000574799 CRY1Q16526 586 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms