RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ATP5DP30049 168 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 SSTR1P30872 391 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 STX2P32856 288 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 PHBP35232 272 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 INHBCP55103 352 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 EIF3IQ13347 325 aaKnown RBP12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 TRA2AQ13595 282 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 ZNF789Q5FWF6 425 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 NKAIN2Q5VXU1 208 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 TMEM71Q6P5X7 295 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 TRMT10BQ6PF06 316 aaKnown RBP12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 CNSTQ6PJW8 725 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 XKR5Q6UX68 686 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 NAPRTQ6XQN6 538 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 USP53Q70EK8 1073 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 TBC1D21Q8IYX1 336 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 ZBTB2Q8N680 514 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 OR5K2Q8NHB8 316 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 LKAAEAR1Q8TD35 194 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 MAGEC3Q8TD91 643 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 NCSTNQ92542 709 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 RHOXF2Q9BQY4 288 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 AARSD1Q9BTE6 412 aaKnown RBP12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 TBC1D10AQ9BXI6 508 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 RDH14Q9HBH5 336 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 TAS2R13Q9NYV9 303 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 SLC24A2Q9UI40 661 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 ATXN7L1Q9ULK2 861 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 WASF3Q9UPY6 502 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 CBSLP0DN79 551 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 ENO3P13929 434 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 SPINK2P20155 84 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 ACADLP28330 430 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 CCKBRP32239 447 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 CBSP35520 551 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 DEKP35659 375 aaKnown RBP12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 CLDN6P56747 220 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 PRKAA1Q13131 559 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 SLMAPQ14BN4 828 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 TEX35Q5T0J7 233 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 PHF19Q5T6S3 580 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 LRRC8EQ6NSJ5 796 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 ARMC6Q6NXE6 501 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 UNC5DQ6UXZ4 953 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 STRA8Q7Z7C7 330 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 OOSP2Q86WS3 158 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 RAB42Q8N4Z0 105 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 LCN9Q8WX39 176 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 INPP5DQ92835 1189 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 ZDHHC12Q96GR4 267 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 LIN37Q96GY3 246 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 CMKLR1Q99788 373 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 PLAC1Q9HBJ0 212 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 TRMT6Q9UJA5 497 aaKnown RBP12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 CDYLQ9Y232 598 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 DHRS7Q9Y394 339 aa12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 COL27A1Q8IZC6 1860 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-206ENST00000573989 NCOR2Q9Y618 2525 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 CCDC187A0A096LP49 1063 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 TCRBV9S1A1TA0A576 114 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 EIF3FO00303 357 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 MATN2O00339 956 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 HGSO14964 777 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 TYRP1P17643 537 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 CD9P21926 228 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 CCNFP41002 786 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 CAPZBP47756 277 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 RGS4P49798 205 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 CLCN7P51798 805 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 LIMK2P53671 638 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 ZFP36L1Q07352 338 aaKnown RBP12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 ABRQ12979 859 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 NAB1Q13506 487 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 FAM45BPQ6NSW5 357 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 DUS1LQ6P1R4 473 aaKnown RBP12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 NEK10Q6ZWH5 1172 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 RELL1Q8IUW5 271 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 DCUN1D3Q8IWE4 304 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 CTAGE3PQ8IX95 158 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 LSMEM2Q8N112 164 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 GPATCH11Q8N954 259 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 PHC3Q8NDX5 983 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 CFAP61Q8NHU2 1237 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 FAM45AQ8TCE6 357 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 FAM136AQ96C01 138 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 NXPE2Q96DL1 559 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 VPS39Q96JC1 886 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 GPR21Q99679 349 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 CPNE1Q99829 537 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 NUDT22Q9BRQ3 303 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 NRSN2Q9GZP1 204 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 RAB33BQ9H082 229 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 SRMSQ9H3Y6 488 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 TFB2MQ9H5Q4 396 aaKnown RBP12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 LRRC4CQ9HCJ2 640 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 TDRKHQ9Y2W6 561 aaKnown RBP12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 ENTPD2Q9Y5L3 495 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 KIF26BQ2KJY2 2108 aa12.43□□□□□ -0.42
TRAPPC1-206ENST00000573989 PRAMEF33A0A0G2JMD5 474 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms