RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SERPINB7O75635 380 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 INMTO95050 263 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 OPRL1P41146 370 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 HSPA7P48741 367 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 GABARAPL2P60520 117 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 ISL1P61371 349 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 MAPKAPK3Q16644 382 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 RGS21Q2M5E4 152 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 BTLAQ7Z6A9 289 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 FAM162AQ96A26 154 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 RBM4BQ9BQ04 359 aaKnown RBP18.72■□□□□ 0.59
SCARF1-206ENST00000573852 NEURL2Q9BR09 285 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 RBM4Q9BWF3 364 aaKnown RBP18.72■□□□□ 0.59
SCARF1-206ENST00000573852 ELOVL2Q9NXB9 296 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 COMMD10Q9Y6G5 202 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 ELOVL7A1L3X0 281 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 PTGES3LE9PB15 166 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 FFAR3O14843 346 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 GPR42O15529 346 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 TAPBPO15533 448 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 GUCA1CO95843 209 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 OTCP00480 354 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 GTDC1Q4AE62 458 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 SPANXN4Q5MJ08 99 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 PHACTR4Q8IZ21 702 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 SVOPLQ8N434 492 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 KRTCAP2Q8N6L1 136 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 PPP3R2Q96LZ3 170 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 BAG5Q9UL15 447 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 B3GNT3Q9Y2A9 372 aa18.72■□□□□ 0.59
SCARF1-206ENST00000573852 LOC100130705A0A1B0GUX0 176 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 CBX4O00257 560 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 FFAR2O15552 330 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 HS6ST1O60243 411 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 IDUAP35475 653 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 GP2P55259 537 aaKnown RBP18.71■□□□□ 0.59
SCARF1-206ENST00000573852 HMGCS1Q01581 520 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 SPIDRQ14159 915 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 GIPC2Q8TF65 315 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 PDLIM5Q96HC4 596 aaKnown RBP18.71■□□□□ 0.59
SCARF1-206ENST00000573852 ZBTB18Q99592 522 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 SLC6A13Q9NSD5 602 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 TMEM189-UBE2V1I3L0A0 370 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 SLC1A7O00341 560 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 VNN2O95498 520 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 ITGB6P18564 788 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 PCMT1P22061 227 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 AKT1P31749 480 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 GDF5P43026 501 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 SGSHP51688 502 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 CDH4P55283 916 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 EPS8Q12929 822 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 PON2Q15165 354 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 CYP2A13Q16696 494 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 NIPAL1Q6NVV3 410 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 ADAMTSL2Q86TH1 951 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 ZFP14Q9HCL3 533 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 ENPP5Q9UJA9 477 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 BLOC1S6Q9UL45 172 aa18.71■□□□□ 0.59
SCARF1-206ENST00000573852 PRAMEF12O95522 483 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 DCTP40126 519 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 GSTM4Q03013 218 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 TAF1CQ15572 869 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-206ENST00000573852 FAM171A1Q5VUB5 890 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 LIX1Q8N485 282 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 NODALQ96S42 347 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 INIPQ9NRY2 104 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 EIF3LQ9Y262 564 aaKnown RBP18.7■□□□□ 0.58
SCARF1-206ENST00000573852 COQ9O75208 318 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 PGRP06401 933 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 ZDHHC11BP0C7U3 371 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 CTF1Q16619 201 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 RUNDC3AQ59EK9 446 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 RSPO2Q6UXX9 243 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-206ENST00000573852 C10orf111Q8N326 155 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 TMCO5AQ8N6Q1 288 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 EID2BQ96D98 161 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 SH3YL1Q96HL8 342 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-206ENST00000573852 ADGRE3Q9BY15 652 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 DPY30Q9C005 99 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 TRNAU1APQ9NX07 287 aaKnown RBP18.7■□□□□ 0.58
SCARF1-206ENST00000573852 TMEFF2Q9UIK5 374 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-206ENST00000573852 FBXO10Q9UK96 956 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 INVSQ9Y283 1065 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 U3KQV3 271 aa18.7■□□□□ 0.58
SCARF1-206ENST00000573852 PLXNA4Q9HCM2 1894 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 MTMR11A4FU01 709 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 H7C0S8 307 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 SCELO95171 688 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 S100BP04271 92 aaPredicted RBP18.69■□□□□ 0.58
SCARF1-206ENST00000573852 PFKLP17858 780 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 MAGEA8P43361 318 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 SGO1Q5FBB7 561 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 ZNF691Q5VV52 312 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 RNF19BQ6ZMZ0 732 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 GCNT7Q6ZNI0 430 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 MICU2Q8IYU8 434 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 OR10Q1Q8NGQ4 319 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 ZNF347Q96SE7 839 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 CCDC90BQ9GZT6 254 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms