RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 SOX13Q9UN79 622 aa14.79□□□□□ -0.04
RAB40B-203ENST00000570676 PCDHB11Q9Y5F2 797 aa14.79□□□□□ -0.04
RAB40B-203ENST00000570676 CCDC78A2IDD5 438 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 CCDC151A5D8V7 595 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 C2orf81A6NN90 581 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 AGAP14A8MT82 685 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 LDB2O43679 373 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 KCNJ13O60928 360 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 UBXN7O94888 489 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 TYRP1P17643 537 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 VCLP18206 1134 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 PGAM1P18669 254 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 LEPRP48357 1165 aaKnown RBP14.78□□□□□ -0.04
RAB40B-203ENST00000570676 ATP1A2P50993 1020 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 NFE2L1Q14494 772 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 LINC00303Q3SY05 128 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 DCAF12Q5T6F0 453 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 ARMC3Q5W041 872 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 TMEM220Q6QAJ8 160 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 AMZ2Q86W34 360 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 PLXDC1Q8IUK5 500 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 RELL1Q8IUW5 271 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 OR13C4Q8NGS5 318 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 ZNF398Q8TD17 642 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 NAT14Q8WUY8 206 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 CAVIN3Q969G5 261 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 TTC25Q96NG3 672 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 TEFMQ96QE5 360 aaKnown RBP14.78□□□□□ -0.04
RAB40B-203ENST00000570676 CTRCQ99895 268 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 TRIM56Q9BRZ2 755 aaKnown RBP14.78□□□□□ -0.04
RAB40B-203ENST00000570676 NAT9Q9BTE0 207 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 KIFC1Q9BW19 673 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 ASPSCR1Q9BZE9 553 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 MRM3Q9HC36 420 aaKnown RBP14.78□□□□□ -0.04
RAB40B-203ENST00000570676 CHRAC1Q9NRG0 131 aa14.78□□□□□ -0.04
RAB40B-203ENST00000570676 FAM237BA0A1B0GVD1 139 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 MROH6A6NGR9 719 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 SGTAO43765 313 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 RAD1O60671 282 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 POP7O75817 140 aaKnown RBP14.77□□□□□ -0.05
RAB40B-203ENST00000570676 SRP72O76094 671 aaKnown RBP14.77□□□□□ -0.05
RAB40B-203ENST00000570676 POLBP06746 335 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 AKT1P31749 480 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 PMS2P54278 862 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 PDE1BQ01064 536 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 TSTD2Q5T7W7 516 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 CES3Q6UWW8 571 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 CEACAM20Q6UY09 585 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 MICALCLQ6ZW33 695 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 NLRP9Q7RTR0 991 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 PRSS42Q7Z5A4 293 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 PALM2Q8IXS6 379 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 RBM12BQ8IXT5 1001 aaKnown RBP14.77□□□□□ -0.05
RAB40B-203ENST00000570676 BEND7Q8N7W2 519 aaPredicted RBP14.77□□□□□ -0.05
RAB40B-203ENST00000570676 ZNF669Q96BR6 464 aaPredicted RBP14.77□□□□□ -0.05
RAB40B-203ENST00000570676 CXorf40BQ96DE9 158 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 TXLNGYQ9BZA5 131 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 CDC42EP4Q9H3Q1 356 aaKnown RBP14.77□□□□□ -0.05
RAB40B-203ENST00000570676 FBXO8Q9NRD0 319 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 ARGLU1Q9NWB6 273 aaPredicted RBP14.77□□□□□ -0.05
RAB40B-203ENST00000570676 NINJ2Q9NZG7 142 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 PILRAQ9UKJ1 303 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 DNMT3AQ9Y6K1 912 aaPredicted RBP14.77□□□□□ -0.05
RAB40B-203ENST00000570676 RPS6KL1Q9Y6S9 549 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 PIKFYVEQ9Y2I7 2098 aa14.77□□□□□ -0.05
RAB40B-203ENST00000570676 CAPN5O15484 640 aaPredicted RBP14.76□□□□□ -0.05
RAB40B-203ENST00000570676 TTC4O95801 387 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 DLGAP3O95886 979 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 ITGB2P05107 769 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 LIFP15018 202 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 MSH3P20585 1137 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 NMBRP28336 390 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 PBLDP30039 288 aaPredicted RBP14.76□□□□□ -0.05
RAB40B-203ENST00000570676 HALP42357 657 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 RPE65Q16518 533 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 KYNUQ16719 465 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 ANKRD20A4Q4UJ75 823 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 BCL7AQ4VC05 210 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 UNC5AQ6ZN44 842 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 CAPN12Q6ZSI9 719 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 TRMT10CQ7L0Y3 403 aaKnown RBP14.76□□□□□ -0.05
RAB40B-203ENST00000570676 DET1Q7L5Y6 550 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 CACNA2D3Q8IZS8 1091 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 EXD3Q8N9H8 876 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 STYXQ8WUJ0 223 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 EXTL1Q92935 676 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 MFSD3Q96ES6 412 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 MED8Q96G25 268 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 ZNF514Q96K75 400 aaPredicted RBP14.76□□□□□ -0.05
RAB40B-203ENST00000570676 DNAJC1Q96KC8 554 aaKnown RBP14.76□□□□□ -0.05
RAB40B-203ENST00000570676 ZNF778Q96MU6 729 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 TGM7Q96PF1 710 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 C19orf43Q9BQ61 176 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 SLC12A9Q9BXP2 914 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 ZNF768Q9H5H4 540 aaKnown RBP14.76□□□□□ -0.05
RAB40B-203ENST00000570676 ASB8Q9H765 288 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 SLC2A6Q9UGQ3 507 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 PSMD13Q9UNM6 376 aa14.76□□□□□ -0.05
RAB40B-203ENST00000570676 TMEM184BQ9Y519 407 aaPredicted RBP14.76□□□□□ -0.05
RAB40B-203ENST00000570676 ATMQ13315 3056 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms