RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 C1orf74Q96LT6 269 aa15.05■□□□□ -0
USP43-202ENST00000570475 TDRD1Q9BXT4 1180 aaKnown RBP15.05■□□□□ -0
USP43-202ENST00000570475 ARHGAP39Q9C0H5 1083 aa15.05■□□□□ -0
USP43-202ENST00000570475 PCDHB8Q9UN66 801 aa15.05■□□□□ -0
USP43-202ENST00000570475 GMPPBQ9Y5P6 360 aa15.05■□□□□ -0
USP43-202ENST00000570475 TBL1XO60907 577 aa15.05■□□□□ -0
USP43-202ENST00000570475 MTX2O75431 263 aa15.05■□□□□ -0
USP43-202ENST00000570475 MATN4O95460 622 aa15.05■□□□□ -0
USP43-202ENST00000570475 EPB42P16452 691 aa15.05■□□□□ -0
USP43-202ENST00000570475 MSH3P20585 1137 aa15.05■□□□□ -0
USP43-202ENST00000570475 TAF1AQ15573 450 aaPredicted RBP15.05■□□□□ -0
USP43-202ENST00000570475 POM121L1PQ3SYA9 428 aa15.05■□□□□ -0
USP43-202ENST00000570475 AHSA2Q719I0 299 aa15.05■□□□□ -0
USP43-202ENST00000570475 ITM2CQ9NQX7 267 aa15.05■□□□□ -0
USP43-202ENST00000570475 ABCD2Q9UBJ2 740 aa15.05■□□□□ -0
USP43-202ENST00000570475 DNMT3LQ9UJW3 386 aa15.05■□□□□ -0
USP43-202ENST00000570475 TRIM17Q9Y577 477 aa15.05■□□□□ -0
USP43-202ENST00000570475 ZNF646O15015 1829 aaPredicted RBP15.05■□□□□ -0
USP43-202ENST00000570475 PRAMEF12O95522 483 aa15.04■□□□□ -0
USP43-202ENST00000570475 DLGAP3O95886 979 aa15.04■□□□□ -0
USP43-202ENST00000570475 PGRP06401 933 aa15.04■□□□□ -0
USP43-202ENST00000570475 DBTP11182 482 aaKnown RBP15.04■□□□□ -0
USP43-202ENST00000570475 OPRL1P41146 370 aa15.04■□□□□ -0
USP43-202ENST00000570475 C6orf141Q5SZD1 244 aa15.04■□□□□ -0
USP43-202ENST00000570475 NADSYN1Q6IA69 706 aa15.04■□□□□ -0
USP43-202ENST00000570475 DOK6Q6PKX4 331 aa15.04■□□□□ -0
USP43-202ENST00000570475 RNF175Q8N4F7 328 aa15.04■□□□□ -0
USP43-202ENST00000570475 OR52J3Q8NH60 311 aa15.04■□□□□ -0
USP43-202ENST00000570475 UTP15Q8TED0 518 aaKnown RBP15.04■□□□□ -0
USP43-202ENST00000570475 ASPSCR1Q9BZE9 553 aa15.04■□□□□ -0
USP43-202ENST00000570475 FAIMQ9NVQ4 179 aa15.04■□□□□ -0
USP43-202ENST00000570475 NLE1Q9NVX2 485 aaPredicted RBP15.04■□□□□ -0
USP43-202ENST00000570475 ZNF451Q9Y4E5 1061 aa15.04■□□□□ -0
USP43-202ENST00000570475 HIST1H2AGP0C0S8 130 aaPredicted RBP15.04■□□□□ -0
USP43-202ENST00000570475 HIST1H2ADP20671 130 aa15.04■□□□□ -0
USP43-202ENST00000570475 ITGALP20701 1170 aa15.04■□□□□ -0
USP43-202ENST00000570475 IGFBP5P24593 272 aa15.04■□□□□ -0
USP43-202ENST00000570475 HTR7P34969 479 aa15.04■□□□□ -0
USP43-202ENST00000570475 FLT3LGP49771 235 aa15.04■□□□□ -0
USP43-202ENST00000570475 EMX2Q04743 252 aa15.04■□□□□ -0
USP43-202ENST00000570475 SPCS2Q15005 226 aa15.04■□□□□ -0
USP43-202ENST00000570475 ELMSAN1Q6PJG2 1045 aa15.04■□□□□ -0
USP43-202ENST00000570475 BTLAQ7Z6A9 289 aa15.04■□□□□ -0
USP43-202ENST00000570475 ADAMTSL2Q86TH1 951 aa15.04■□□□□ -0
USP43-202ENST00000570475 ZFAND4Q86XD8 727 aa15.04■□□□□ -0
USP43-202ENST00000570475 SLC44A2Q8IWA5 706 aaPredicted RBP15.04■□□□□ -0
USP43-202ENST00000570475 SPPL2AQ8TCT8 520 aa15.04■□□□□ -0
USP43-202ENST00000570475 CD200R1Q8TD46 325 aa15.04■□□□□ -0
USP43-202ENST00000570475 DPF3Q92784 378 aa15.04■□□□□ -0
USP43-202ENST00000570475 HIST1H2AHQ96KK5 128 aa15.04■□□□□ -0
USP43-202ENST00000570475 PPP3R2Q96LZ3 170 aa15.04■□□□□ -0
USP43-202ENST00000570475 HIST1H2AJQ99878 128 aa15.04■□□□□ -0
USP43-202ENST00000570475 H2AFJQ9BTM1 129 aa15.04■□□□□ -0
USP43-202ENST00000570475 IKZF5Q9H5V7 419 aa15.04■□□□□ -0
USP43-202ENST00000570475 OLA1Q9NTK5 396 aaKnown RBP15.04■□□□□ -0
USP43-202ENST00000570475 FAM118AQ9NWS6 357 aa15.04■□□□□ -0
USP43-202ENST00000570475 H0Y858 1186 aa15.04■□□□□ -0
USP43-202ENST00000570475 NDUFS2O75306 463 aa15.04■□□□□ -0
USP43-202ENST00000570475 DUSP11O75319 330 aaKnown RBP15.04■□□□□ -0
USP43-202ENST00000570475 HOXD8P13378 290 aaPredicted RBP15.04■□□□□ -0
USP43-202ENST00000570475 POU1F1P28069 291 aa15.04■□□□□ -0
USP43-202ENST00000570475 DAB2P98082 770 aa15.04■□□□□ -0
USP43-202ENST00000570475 CD300CQ08708 224 aa15.04■□□□□ -0
USP43-202ENST00000570475 PWP1Q13610 501 aa15.04■□□□□ -0
USP43-202ENST00000570475 SF1Q15637 639 aaKnown RBP15.04■□□□□ -0
USP43-202ENST00000570475 PHKG1Q16816 387 aa15.04■□□□□ -0
USP43-202ENST00000570475 CES5AQ6NT32 575 aa15.04■□□□□ -0
USP43-202ENST00000570475 PHYKPLQ8IUZ5 450 aa15.04■□□□□ -0
USP43-202ENST00000570475 CRISPLD1Q9H336 500 aa15.04■□□□□ -0
USP43-202ENST00000570475 SACM1LQ9NTJ5 587 aa15.04■□□□□ -0
USP43-202ENST00000570475 TUBA8Q9NY65 449 aaPredicted RBP15.04■□□□□ -0
USP43-202ENST00000570475 CD84Q9UIB8 345 aa15.04■□□□□ -0
USP43-202ENST00000570475 SAMHD1Q9Y3Z3 626 aaKnown RBP15.04■□□□□ -0
USP43-202ENST00000570475 LOC100130705A0A1B0GUX0 176 aa15.03■□□□□ -0
USP43-202ENST00000570475 RFXANKO14593 260 aa15.03■□□□□ -0
USP43-202ENST00000570475 CLPXO76031 633 aa15.03■□□□□ -0
USP43-202ENST00000570475 RECQL5O94762 991 aaPredicted RBP15.03■□□□□ -0
USP43-202ENST00000570475 RPS17P08708 135 aaKnown RBP15.03■□□□□ -0
USP43-202ENST00000570475 MZF1P28698 734 aaPredicted RBP15.03■□□□□ -0
USP43-202ENST00000570475 MAGEA10P43363 369 aaPredicted RBP15.03■□□□□ -0
USP43-202ENST00000570475 TIAL1Q01085 375 aaKnown RBP eCLIP15.03■□□□□ -0
USP43-202ENST00000570475 INAQ16352 499 aa15.03■□□□□ -0
USP43-202ENST00000570475 UHRF1Q96T88 793 aaPredicted RBP15.03■□□□□ -0
USP43-202ENST00000570475 ZIM2Q9NZV7 527 aa15.03■□□□□ -0
USP43-202ENST00000570475 PDP1Q9P0J1 537 aaPredicted RBP15.03■□□□□ -0
USP43-202ENST00000570475 ERVK-18Q9QC07 812 aa15.03■□□□□ -0
USP43-202ENST00000570475 FUOMA2VDF0 154 aa15.03■□□□□ -0
USP43-202ENST00000570475 ABCB7O75027 752 aa15.03■□□□□ -0
USP43-202ENST00000570475 CLDN7O95471 211 aa15.03■□□□□ -0
USP43-202ENST00000570475 FAM163BP0C2L3 166 aa15.03■□□□□ -0
USP43-202ENST00000570475 HTR1EP28566 365 aa15.03■□□□□ -0
USP43-202ENST00000570475 PSMD8P48556 350 aa15.03■□□□□ -0
USP43-202ENST00000570475 SGSHP51688 502 aa15.03■□□□□ -0
USP43-202ENST00000570475 DMC1Q14565 340 aa15.03■□□□□ -0
USP43-202ENST00000570475 SMN1Q16637 294 aaKnown RBP15.03■□□□□ -0
USP43-202ENST00000570475 ZDHHC21Q8IVQ6 265 aa15.03■□□□□ -0
USP43-202ENST00000570475 SYTL1Q8IYJ3 562 aa15.03■□□□□ -0
USP43-202ENST00000570475 TERB1Q8NA31 727 aa15.03■□□□□ -0
USP43-202ENST00000570475 RAB2BQ8WUD1 216 aa15.03■□□□□ -0
USP43-202ENST00000570475 SLC39A13Q96H72 371 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms