RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 LIMK2P53671 638 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 PLEKHS1Q5SXH7 462 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 PTRHD1Q6GMV3 140 aaKnown RBP12.1□□□□□ -0.47
RNF40-211ENST00000567365 TMEM71Q6P5X7 295 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 USP53Q70EK8 1073 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 ZBED8Q8IZ13 594 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 OTUD6BQ8N6M0 293 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 OR4D9Q8NGE8 314 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 GIMAP7Q8NHV1 300 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 GSDMBQ8TAX9 411 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 RSC1A1Q92681 617 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 TFGQ92734 400 aaPredicted RBP12.1□□□□□ -0.47
RNF40-211ENST00000567365 CFAP36Q96G28 342 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 ATXN7L3BQ96GX2 97 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 PANX3Q96QZ0 392 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 SLC30A3Q99726 388 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 DPYSL5Q9BPU6 564 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 MENTQ9BUN1 341 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 FAM129AQ9BZQ8 928 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 NRSN2Q9GZP1 204 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 SEMA6CQ9H3T2 930 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 MVB12BQ9H7P6 319 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 SAYSD1Q9NPB0 183 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 SMYD2Q9NRG4 433 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 IMP3Q9NV31 184 aaKnown RBP12.1□□□□□ -0.47
RNF40-211ENST00000567365 TMEM9Q9P0T7 183 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 SLC17A6Q9P2U8 582 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 DKK4Q9UBT3 224 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 EPHA6Q9UF33 1036 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 SLC24A2Q9UI40 661 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 PFDN6O15212 129 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 ZW10O43264 779 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 DUX1O43812 170 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 UBXN7O94888 489 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 CD9P21926 228 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 NDUFS1P28331 727 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 ATP5DP30049 168 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 SSTR1P30872 391 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 CAPZBP47756 277 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 INHBCP55103 352 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 GPX6P59796 221 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 BIRC2Q13490 618 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 GRB7Q14451 532 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 C16orf72Q14CZ0 275 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 AMZ1Q400G9 498 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 IGF2-ASQ6U949 168 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 ARHGAP22Q7Z5H3 698 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 PIM3Q86V86 326 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 RELL1Q8IUW5 271 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 TRIM48Q8IWZ4 208 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 OR10G6Q8NH81 332 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 KCNJ9Q92806 393 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 TMEM159Q96B96 161 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 TMEM74Q96NL1 305 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 AARSD1Q9BTE6 412 aaKnown RBP12.09□□□□□ -0.47
RNF40-211ENST00000567365 TSSK1BQ9BXA7 367 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 TFB2MQ9H5Q4 396 aaKnown RBP12.09□□□□□ -0.47
RNF40-211ENST00000567365 FAM114A2Q9NRY5 505 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 SEMA5BQ9P283 1151 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 HEBP2Q9Y5Z4 205 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 PSAT1Q9Y617 370 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 COMMD10Q9Y6G5 202 aa12.09□□□□□ -0.47
RNF40-211ENST00000567365 ADAMTS20P59510 1910 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 CHD6Q8TD26 2715 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 TCRBV9S1A1TA0A576 114 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 PMS2P1A4D2B8 440 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 SRRM3A6NNA2 597 aaPredicted RBP12.08□□□□□ -0.48
RNF40-211ENST00000567365 TMX2-CTNND1H3BSU7 103 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 IFRD1O00458 451 aaPredicted RBP12.08□□□□□ -0.48
RNF40-211ENST00000567365 KPNA5O15131 536 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 DXOO77932 396 aaKnown RBP12.08□□□□□ -0.48
RNF40-211ENST00000567365 APOA4P06727 396 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 MAGEA4P43358 317 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 LSSP48449 732 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 CARSP49589 748 aaKnown RBP12.08□□□□□ -0.48
RNF40-211ENST00000567365 MGAT5Q09328 741 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 HSPA14Q0VDF9 509 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 TRA2AQ13595 282 aaKnown RBP eCLIP12.08□□□□□ -0.48
RNF40-211ENST00000567365 BRD3Q15059 726 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 MAP9Q49MG5 647 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 OTOAQ7RTW8 1153 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 TBC1D21Q8IYX1 336 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 PHC3Q8NDX5 983 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 ACVR1CQ8NER5 493 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 OR5AR1Q8NGP9 310 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 PYROXD1Q8WU10 500 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 C9orf72Q96LT7 481 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 NRTNQ99748 197 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 LRRC4CQ9HCJ2 640 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 DHRS7Q9Y394 339 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 PCDHGA8Q9Y5G5 932 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 COLEC10Q9Y6Z7 277 aa12.08□□□□□ -0.48
RNF40-211ENST00000567365 AHCTF1Q8WYP5 2266 aa12.07□□□□□ -0.48
RNF40-211ENST00000567365 DSPP15924 2871 aaKnown RBP12.07□□□□□ -0.48
RNF40-211ENST00000567365 CCDC187A0A096LP49 1063 aa12.07□□□□□ -0.48
RNF40-211ENST00000567365 OR5K3A6NET4 321 aa12.07□□□□□ -0.48
RNF40-211ENST00000567365 FAM159BA6NKW6 160 aa12.07□□□□□ -0.48
RNF40-211ENST00000567365 MATN4O95460 622 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms