RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 TIFAQ96CG3 184 aa5.9□□□□□ -1.47
CNOT1-211ENST00000567188 MYOCQ99972 504 aa5.9□□□□□ -1.47
CNOT1-211ENST00000567188 RC3H2Q9HBD1 1191 aaKnown RBP5.9□□□□□ -1.47
CNOT1-211ENST00000567188 LATS2Q9NRM7 1088 aa5.9□□□□□ -1.47
CNOT1-211ENST00000567188 LEF1Q9UJU2 399 aaPredicted RBP5.9□□□□□ -1.47
CNOT1-211ENST00000567188 RAP2CQ9Y3L5 183 aa5.9□□□□□ -1.47
CNOT1-211ENST00000567188 TRAV19A0A0A6YYK7 116 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 LCHNA4D1U4 455 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 HMX3A6NHT5 357 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 FAM189A1O60320 539 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PCDHGA12O60330 932 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CCNT2O60583 730 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 AVILO75366 819 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 VPS26AO75436 327 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 SAGP10523 405 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ZNF14P17017 642 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CD53P19397 219 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 MNDAP41218 407 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 GLUD2P49448 558 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 YWHAZP63104 245 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PRKG2Q13237 762 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 DGCR6Q14129 220 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 TEAD2Q15562 447 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 KCNJ8Q15842 424 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 HIST2H2ACQ16777 129 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 MARCH8Q5T0T0 291 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 LRIF1Q5T3J3 769 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 HIST2H2AA3Q6FI13 130 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 DPP10Q8N608 796 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 C10orf53Q8N6V4 93 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 LNX1Q8TBB1 728 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 FIG4Q92562 907 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 SLC29A1Q99808 456 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 THUMPD3Q9BV44 507 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ZNF416Q9BWM5 594 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 TKTL2Q9H0I9 626 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 QRSL1Q9H0R6 528 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 APOBEC3GQ9HC16 384 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 XPNPEP1Q9NQW7 623 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PAQR5Q9NXK6 330 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ARMCX1Q9P291 453 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CORO2BQ9UQ03 480 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 HSPB11Q9Y547 144 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 C2orf71A6NGG8 1288 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 L7N2F9 121 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 SNX4O95219 450 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 SHBGP04278 402 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 SNRPB2P08579 225 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ERCC2P18074 760 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 MAPK9P45984 424 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 RORCP51449 518 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ATP12AP54707 1039 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 WNT7BP56706 349 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CDKL1Q00532 357 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 MLLT1Q03111 559 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 LRP8Q14114 963 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 OR52E8Q6IFG1 317 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 RFWD3Q6PCD5 774 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 METTL25Q8N6Q8 603 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 NCSTNQ92542 709 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CNDP2Q96KP4 475 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PRICKLE1Q96MT3 831 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CIPCQ9C0C6 399 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 EPB41L4BQ9H329 900 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 TP63Q9H3D4 680 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 SEC14L4Q9UDX3 406 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PPIEQ9UNP9 301 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 NCKAP1Q9Y2A7 1128 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 TBC1D30Q9Y2I9 924 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PLXNA1Q9UIW2 1896 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 GLUD1P00367 558 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CA3P07451 260 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PTX3P26022 381 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ACADLP28330 430 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 IFNGR2P38484 337 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 GSTM5P46439 218 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ALDH9A1P49189 494 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CAV3P56539 151 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 SYT16Q17RD7 645 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ALG11Q2TAA5 492 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 USP39Q53GS9 565 aaKnown RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 UBXN11Q5T124 520 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 HLA-DQA1Q5Y7H0 255 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 OGFOD2Q6N063 350 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PNCKQ6P2M8 343 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 HSDL2Q6YN16 418 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 GRASPQ7Z6J2 395 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PDZD9Q8IXQ8 264 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 MCOLN2Q8IZK6 566 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 STK40Q8N2I9 435 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 OR6K2Q8NGY2 324 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 AGR3Q8TD06 166 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ATG4AQ8WYN0 398 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 CYP2S1Q96SQ9 504 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 TTPALQ9BTX7 342 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 IL22Q9GZX6 179 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PRDM12Q9H4Q4 367 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 GAREM1Q9H706 876 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 ZDHHC4Q9NPG8 344 aa5.89□□□□□ -1.47
CNOT1-211ENST00000567188 PRMT8Q9NR22 394 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms