RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 RPS18P62269 152 aaKnown RBP14.56□□□□□ -0.08
RNF40-209ENST00000566703 TMPRSS15P98073 1019 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 OLIG2Q13516 323 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 KCTD11Q693B1 232 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 FBXO38Q6PIJ6 1188 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 HPS6Q86YV9 775 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 ADAMTS17Q8TE56 1095 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 STYXQ8WUJ0 223 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 TFGQ92734 400 aaPredicted RBP14.56□□□□□ -0.08
RNF40-209ENST00000566703 PPM1MQ96MI6 270 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 DPH2Q9BQC3 489 aaPredicted RBP14.56□□□□□ -0.08
RNF40-209ENST00000566703 ING2Q9H160 280 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 FAM96AQ9H5X1 160 aa14.56□□□□□ -0.08
RNF40-209ENST00000566703 NLE1Q9NVX2 485 aaPredicted RBP14.56□□□□□ -0.08
RNF40-209ENST00000566703 GSAPA4D1B5 854 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 C2orf74A8MZ97 194 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 QSOX1O00391 747 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 CEACAM4O75871 244 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 AP2A2O94973 939 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 PDGFAP04085 211 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 GP1BBP13224 206 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 PSMA3P25788 255 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 ACRV1P26436 265 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 MC4RP32245 332 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 ARCN1P48444 511 aaKnown RBP14.55□□□□□ -0.08
RNF40-209ENST00000566703 CCL11P51671 97 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 PGDP52209 483 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 MLLT10P55197 1068 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 NAP1L1P55209 391 aaKnown RBP14.55□□□□□ -0.08
RNF40-209ENST00000566703 AMIGO1Q86WK6 493 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 NAT14Q8WUY8 206 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 CLIP3Q96DZ5 547 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 CDKN2AIPNLQ96HQ2 116 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 TLR10Q9BXR5 811 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 CHRNA10Q9GZZ6 450 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 TCFL5Q9UL49 500 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 ZNF451Q9Y4E5 1061 aa14.55□□□□□ -0.08
RNF40-209ENST00000566703 RCCD1A6NED2 376 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 GOLGA6L9A6NEM1 432 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 TTLL8A6PVC2 850 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 BTN3A3O00478 584 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 BTN3A1O00481 513 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 DNAJB5O75953 348 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 ST6GAL1P15907 406 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 CYP2A7P20853 494 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 CACNG1Q06432 222 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 ABRQ12979 859 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 IL10RAQ13651 578 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 BOP1Q14137 746 aaKnown RBP14.54□□□□□ -0.08
RNF40-209ENST00000566703 SPARCL1Q14515 664 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 ZRANB3Q5FWF4 1079 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 ZNF789Q5FWF6 425 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 SERPINA9Q86WD7 417 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 EFCAB3Q8N7B9 438 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 GALNT11Q8NCW6 608 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 PHC3Q8NDX5 983 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 OR52E1Q8NGJ3 308 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 OR1L3Q8NH93 324 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 DNAJC1Q96KC8 554 aaKnown RBP14.54□□□□□ -0.08
RNF40-209ENST00000566703 TRAPPC9Q96Q05 1148 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 C17orf62Q9BQA9 187 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 LRRC40Q9H9A6 602 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 ACTR5Q9H9F9 607 aaPredicted RBP14.54□□□□□ -0.08
RNF40-209ENST00000566703 PCMTD2Q9NV79 361 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 G3BP2Q9UN86 482 aaKnown RBP14.54□□□□□ -0.08
RNF40-209ENST00000566703 SNX7Q9UNH6 387 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 DUSP10Q9Y6W6 482 aa14.54□□□□□ -0.08
RNF40-209ENST00000566703 ARGFXA6NJG6 315 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 TMEM150CB9EJG8 249 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 LIN7AO14910 233 aaPredicted RBP14.53□□□□□ -0.08
RNF40-209ENST00000566703 VPS4BO75351 444 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 TMEM63AO94886 807 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 CAPN1P07384 714 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 CD63P08962 238 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 AGXTP21549 392 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 PDHA2P29803 388 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 NSG1P42857 185 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 PTGIRP43119 386 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 CDKN1CP49918 316 aaPredicted RBP14.53□□□□□ -0.08
RNF40-209ENST00000566703 VAV2P52735 878 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 ITGA1P56199 1179 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 PLOD1Q02809 727 aaPredicted RBP14.53□□□□□ -0.08
RNF40-209ENST00000566703 ITIH4Q14624 930 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 P3H1Q32P28 736 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 PRAMEF17Q5VTA0 474 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 LCN10Q6JVE6 187 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 ARHGEF18Q6ZSZ5 1173 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 MED25Q71SY5 747 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 TAS2R42Q7RTR8 314 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 SYTL1Q8IYJ3 562 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 ADGRF3Q8IZF5 1079 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 ENDOVQ8N8Q3 282 aaKnown RBP14.53□□□□□ -0.08
RNF40-209ENST00000566703 TMEM102Q8N9M5 508 aaPredicted RBP14.53□□□□□ -0.08
RNF40-209ENST00000566703 LRRC57Q8N9N7 239 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 GLIS1Q8NBF1 620 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 ALG3Q92685 438 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.53□□□□□ -0.08
RNF40-209ENST00000566703 PSMG3-AS1Q96PY0 264 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 ALS2CR12Q96Q35 445 aa14.53□□□□□ -0.08
RNF40-209ENST00000566703 FAM118BQ9BPY3 351 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms