RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SMIM10L2AP0DMW4 78 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 SMIM10L2BP0DMW5 78 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CASP1P29466 404 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CCND2P30279 289 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 DPP6P42658 865 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 PPP3CCP48454 512 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 FNTAP49354 379 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 RPS3AP61247 264 aaKnown RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 RPS6P62753 249 aaKnown RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CAMK1Q14012 370 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 TCTN1Q2MV58 587 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 TTMPQ5BVD1 217 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 ARHGEF16Q5VV41 709 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 NAA35Q5VZE5 725 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 DBX2Q6ZNG2 339 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 HOOK3Q86VS8 718 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 NLRP14Q86W24 1093 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 NCSTNQ92542 709 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CDHR1Q96JP9 859 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 INPP4AQ96PE3 977 aaPredicted RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CD180Q99467 661 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 TMBIM4Q9HC24 238 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 SEC63Q9UGP8 760 aaKnown RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 LCTP09848 1927 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 TRBV5-3A0A0A0MS03 114 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 A0A1B0GUA9 196 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 GTPBP10A4D1E9 387 aaKnown RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 ZNF263O14978 683 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 LIASO43766 372 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CCNT1O60563 726 aaKnown RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 MOCS3O95396 460 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 RARGP13631 454 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 PRKCIP41743 596 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 MNAT1P51948 309 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 TFAP4Q01664 338 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 MGAT3Q09327 533 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 ITGB3BPQ13352 177 aaPredicted RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 DAZAP2Q15038 168 aaPredicted RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 KRT79Q5XKE5 535 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 SYCE2Q6PIF2 218 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 MOXD1Q6UVY6 613 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 C6orf89Q6UWU4 347 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CCDC121Q6ZUS5 278 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 UEVLDQ8IX04 471 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CCDC65Q8IXS2 484 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 GPR65Q8IYL9 337 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 RASGEF1CQ8N431 466 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 NFKBIDQ8NI38 313 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 ZNF473Q8WTR7 871 aaKnown RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 RAD54LQ92698 747 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CCDC43Q96MW1 224 aaKnown RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 SPATA33Q96N06 139 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 ANKRD27Q96NW4 1050 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 RAB17Q9H0T7 212 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 MAD2L2Q9UI95 211 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 BARX2Q9UMQ3 279 aaPredicted RBP4.21□□□□□ -1.74
LINC00561-201ENST00000565815 DHDHQ9UQ10 334 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 OSGIN2Q9Y236 505 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 TRPV2Q9Y5S1 764 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 KIAA1217Q5T5P2 1943 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 TET1Q8NFU7 2136 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 GOLGA6L10A0A0M3HER8 536 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 A0A1W2PQM1 296 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 GMNCA6NCL1 334 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CFAP73A6NFT4 308 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 LRRC53A6NM62 1247 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 PGRMC1O00264 195 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 PPP6CO00743 305 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ATP2C2O75185 946 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 PRR35P0CG20 571 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 IL7RP16871 459 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CALRP27797 417 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 DRG2P55039 364 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 STK4Q13043 487 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 RPS6KA1Q15418 735 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ASIC2Q16515 512 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ZCWPW2Q504Y3 356 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ASPRV1Q53RT3 343 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 WLSQ5T9L3 541 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CYP20A1Q6UW02 462 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 C16orf54Q6UWD8 224 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CRELD2Q6UXH1 353 aaPredicted RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 C15orf39Q6ZRI6 1047 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 SEPT14Q6ZU15 432 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 THNSL1Q8IYQ7 743 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 GALNT16Q8N428 558 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 COLGALT1Q8NBJ5 622 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 SUMF1Q8NBK3 374 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 KIAA0895Q8NCT3 520 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 ZNF558Q96NG5 402 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 KLHL5Q96PQ7 755 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 MTMR9Q96QG7 549 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 CCT8L2Q96SF2 557 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 MRPL9Q9BYD2 267 aaKnown RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 NPFFR1Q9GZQ6 430 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 TMEM117Q9H0C3 514 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 MAP6D1Q9H9H5 199 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 SPG21Q9NZD8 308 aa4.2□□□□□ -1.74
LINC00561-201ENST00000565815 SUCLA2Q9P2R7 463 aaPredicted RBP4.2□□□□□ -1.74
LINC00561-201ENST00000565815 IPO11Q9UI26 975 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms