RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CSRP2Q16527 193 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 DEFB133Q30KQ1 61 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 ZNF658BQ4V348 819 aaPredicted RBP7.61□□□□□ -1.19
CDH1-208ENST00000565810 TNFAIP8L3Q5GJ75 292 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 CAPRIN2Q6IMN6 1127 aaKnown RBP7.61□□□□□ -1.19
CDH1-208ENST00000565810 IYDQ6PHW0 289 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 TMEM207Q6UWW9 146 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 UNC5DQ6UXZ4 953 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 CYHR1Q6ZMK1 362 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 FRA10AC1Q70Z53 315 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 UBE2R2Q712K3 238 aaPredicted RBP7.61□□□□□ -1.19
CDH1-208ENST00000565810 PIWIL4Q7Z3Z4 852 aaKnown RBP7.61□□□□□ -1.19
CDH1-208ENST00000565810 ADAMTSL2Q86TH1 951 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 SLC9B2Q86UD5 537 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 PDZD3Q86UT5 571 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 EXOC3L1Q86VI1 746 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 NRROSQ86YC3 692 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 VRK3Q8IV63 474 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 RAB42Q8N4Z0 105 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 MINDY1Q8N5J2 469 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 STAG3L4Q8TBR4 150 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 MAPK15Q8TD08 544 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 MCOLN3Q8TDD5 553 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 SAP25Q8TEE9 199 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 KCTD4Q8WVF5 259 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 ANKRD49Q8WVL7 239 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 NXNL1Q96CM4 212 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 CXorf40BQ96DE9 158 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 ATP6V1G3Q96LB4 118 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 UBXN10Q96LJ8 280 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 C12orf66Q96MD2 445 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 FERD3LQ96RJ6 166 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 INSM2Q96T92 566 aaPredicted RBP7.61□□□□□ -1.19
CDH1-208ENST00000565810 SH3GL2Q99962 352 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 TRIT1Q9H3H1 467 aaKnown RBP7.61□□□□□ -1.19
CDH1-208ENST00000565810 TFB2MQ9H5Q4 396 aaKnown RBP7.61□□□□□ -1.19
CDH1-208ENST00000565810 MVB12BQ9H7P6 319 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 KCNK9Q9NPC2 374 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 MED4Q9NPJ6 270 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 SEMA4GQ9NTN9 838 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 IMP3Q9NV31 184 aaKnown RBP7.61□□□□□ -1.19
CDH1-208ENST00000565810 EVA1BQ9NVM1 165 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 PCOLCE2Q9UKZ9 415 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 GRID1Q9ULK0 1009 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 RNF112Q9ULX5 631 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 PSMD13Q9UNM6 376 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 CDYLQ9Y232 598 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 PCDHGB2Q9Y5G2 931 aa7.61□□□□□ -1.19
CDH1-208ENST00000565810 TRBV23OR9-2A0A075B6M9 112 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 LNP1A1A4G5 178 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 PRR19A6NJB7 356 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 OR52A4PA6NMU1 304 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 B4DGG1 531 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 PROB1E7EW31 1015 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 GFYI3L273 518 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 FFAR2O15552 330 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 ZW10O43264 779 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 PCDHGA12O60330 932 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SPAG7O75391 227 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 MATN4O95460 622 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 TSPAN12O95859 305 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 S100BP04271 92 aaPredicted RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 ENO2P09104 434 aaPredicted RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 MTHFD1P11586 935 aaKnown RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 XRCC1P18887 633 aaPredicted RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 TFEBP19484 476 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 TAC1P20366 129 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 ACADLP28330 430 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 GLRBP48167 497 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 RPIAP49247 311 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 CSRP3P50461 194 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 IRF9Q00978 393 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SHBQ15464 509 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 RPE65Q16518 533 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 CCDC153Q494R4 210 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 AASDHQ4L235 1098 aaPredicted RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 C6orf132Q5T0Z8 1188 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 TCEAL6Q6IPX3 200 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SH2D5Q6ZV89 423 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 CLEC14AQ86T13 490 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 GPSM1Q86YR5 675 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 DCUN1D3Q8IWE4 304 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 RBM12BQ8IXT5 1001 aaKnown RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 TBC1D21Q8IYX1 336 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 PLD6Q8N2A8 252 aaKnown RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 SLC25A45Q8N413 288 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SPATA6LQ8N4H0 392 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 CCDC63Q8NA47 563 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SPDYE1Q8NFV5 336 aaPredicted RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 OR6C4Q8NGE1 309 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 RHEBL1Q8TAI7 183 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 ZFPM2Q8WW38 1151 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 ASB11Q8WXH4 323 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 TCEAL3Q969E4 200 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 KIAA1191Q96A73 305 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 RAD51AP1Q96B01 352 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SH3KBP1Q96B97 665 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 ARL8AQ96BM9 186 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 TLCD1Q96CP7 247 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 APOPT1Q96IL0 206 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms