RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 RAB11FIP2Q7L804 512 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 TMPRSS9Q7Z410 1059 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 SDCCAG8Q86SQ7 713 aaPredicted RBP9.41□□□□□ -0.9
CNOT1-207ENST00000565605 LDB1Q86U70 411 aaPredicted RBP9.41□□□□□ -0.9
CNOT1-207ENST00000565605 HOOK3Q86VS8 718 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 SLITRK4Q8IW52 837 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 FBXO39Q8N4B4 442 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 EXD3Q8N9H8 876 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 NCSTNQ92542 709 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 ZNF669Q96BR6 464 aaPredicted RBP9.41□□□□□ -0.9
CNOT1-207ENST00000565605 TRIM44Q96DX7 344 aaPredicted RBP9.41□□□□□ -0.9
CNOT1-207ENST00000565605 CCDC74BQ96LY2 380 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 SLC46A1Q96NT5 459 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 CMKLR1Q99788 373 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 TBC1D10AQ9BXI6 508 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 COG4Q9H9E3 785 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 SLC40A1Q9NP59 571 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 THSD1Q9NS62 852 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 MAD1L1Q9Y6D9 718 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 PRSS21Q9Y6M0 314 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 SPTA1P02549 2419 aa9.41□□□□□ -0.9
CNOT1-207ENST00000565605 UBR5O95071 2799 aaPredicted RBP9.41□□□□□ -0.9
CNOT1-207ENST00000565605 FAM237BA0A1B0GVD1 139 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 NDC80O14777 642 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 LIN7AO14910 233 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 HGSO14964 777 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 TTI1O43156 1089 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 OR1I1O60431 355 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 NDUFS3O75489 264 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 UBXN7O94888 489 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 TNFSF15O95150 251 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 THRAP10827 490 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 MPSTP25325 297 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 NDUFS1P28331 727 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 CSTF2P33240 577 aaKnown RBP eCLIP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 LIMK2P53671 638 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 PLOD1Q02809 727 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 TRA2AQ13595 282 aaKnown RBP eCLIP9.4□□□□□ -0.93e-8■□□□□ 10.8
CNOT1-207ENST00000565605 THOC5Q13769 683 aaKnown RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 BOP1Q14137 746 aaKnown RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 PLCL1Q15111 1095 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 DNAJC21Q5F1R6 531 aaKnown RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 SNAP47Q5SQN1 464 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 RNF187Q5TA31 235 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 PTRHD1Q6GMV3 140 aaKnown RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 DUS1LQ6P1R4 473 aaKnown RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 KLHL35Q6PF15 583 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 WDR74Q6RFH5 385 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 LRRC6Q86X45 466 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 PLXDC1Q8IUK5 500 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 LILRA3Q8N6C8 439 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 SPATA4Q8NEY3 305 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 GPR150Q8NGU9 434 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 ELMO1Q92556 727 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 STAMBPL1Q96FJ0 436 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 RMDN2Q96LZ7 410 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 C16orf45Q96MC5 204 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 PANX3Q96QZ0 392 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 INSM2Q96T92 566 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 KRT12Q99456 494 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 TRIM51Q9BSJ1 452 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 TRIM4Q9C037 500 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 TMEM9Q9P0T7 183 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 MARCH4Q9P2E8 410 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 PISDQ9UG56 409 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 GNPTGQ9UJJ9 305 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 HEBP2Q9Y5Z4 205 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 CFAP20Q9Y6A4 193 aaKnown RBP9.4□□□□□ -0.9
CNOT1-207ENST00000565605 RPS6KL1Q9Y6S9 549 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 COLEC10Q9Y6Z7 277 aa9.4□□□□□ -0.9
CNOT1-207ENST00000565605 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
CNOT1-207ENST00000565605 PRAMEF33A0A0G2JMD5 474 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 UBA6A0AVT1 1052 aaPredicted RBP9.39□□□□□ -0.91
CNOT1-207ENST00000565605 EFCAB8A8MWE9 144 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 CDRT15L2A8MXV6 281 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 GOLGA8KD6RF30 607 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 GOLGA8TH3BQL2 631 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 PRMT5O14744 637 aaPredicted RBP9.39□□□□□ -0.91
CNOT1-207ENST00000565605 USP1O94782 785 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 APOA4P06727 396 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 ITGA2BP08514 1039 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 HGFP14210 728 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 TYRP1P17643 537 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 PGAM1P18669 254 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 OGNP20774 298 aaKnown RBP9.39□□□□□ -0.91
CNOT1-207ENST00000565605 ARNTP27540 789 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 MAGEA3P43357 314 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 PREPP48147 710 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 CD151P48509 253 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 MAPK10P53779 464 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 EIF3BP55884 814 aaKnown RBP9.39□□□□□ -0.91
CNOT1-207ENST00000565605 CKAP4Q07065 602 aaKnown RBP9.39□□□□□ -0.91
CNOT1-207ENST00000565605 SRSF1Q07955 248 aaKnown RBP eCLIP9.39□□□□□ -0.91
CNOT1-207ENST00000565605 C2orf54Q08AI8 447 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 CLN3Q13286 438 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 C16orf72Q14CZ0 275 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 MORF4L2Q15014 288 aa9.39□□□□□ -0.91
CNOT1-207ENST00000565605 BRD3Q15059 726 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms