RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TBX18O95935 607 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 ZNF26P17031 533 aaPredicted RBP3.92□□□□□ -1.78
CHD9-212ENST00000564641 MSNP26038 577 aaKnown RBP3.92□□□□□ -1.78
CHD9-212ENST00000564641 PIP4K2AP48426 406 aaPredicted RBP3.92□□□□□ -1.78
CHD9-212ENST00000564641 TUBP50607 506 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 DCAF7P61962 342 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 TMF1P82094 1093 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 ZBED6P86452 979 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 KIR2DS5Q14953 304 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 CCDC184Q52MB2 194 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 LCN10Q6JVE6 187 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 PACS1Q6VY07 963 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 LONP2Q86WA8 852 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 HEATR4Q86WZ0 1026 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 SLC44A1Q8WWI5 657 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 PSPC1Q8WXF1 523 aaKnown RBP3.92□□□□□ -1.78
CHD9-212ENST00000564641 HVCN1Q96D96 273 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 RNF125Q96EQ8 232 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 PPP1R13BQ96KQ4 1090 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 ART5Q96L15 291 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 SLC28A3Q9HAS3 691 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 SMC4Q9NTJ3 1288 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 BCCIPQ9P287 314 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD9-212ENST00000564641 STK39Q9UEW8 545 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 INTS6Q9UL03 887 aaKnown RBP3.92□□□□□ -1.78
CHD9-212ENST00000564641 RABGAP1Q9Y3P9 1069 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 MON2Q7Z3U7 1717 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 PEAK1Q9H792 1746 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 PCDH11XQ9BZA7 1347 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 PCDH11YQ9BZA8 1340 aa3.92□□□□□ -1.78
CHD9-212ENST00000564641 LTN1O94822 1766 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 ANKRD36BQ8N2N9 1353 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 USP54Q70EL1 1684 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 ANKRD18BA2A2Z9 1011 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 DYNC1I1O14576 645 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 NR3C1P04150 777 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 IGHV4-38-2P0DP08 117 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 CLNS1AP54105 237 aaKnown RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 NAP1L1P55209 391 aaKnown RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 RIPK4P57078 832 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 IRX3P78415 501 aaPredicted RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 QSER1Q2KHR3 1735 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 INO80CQ6PI98 192 aaPredicted RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 FASTKD5Q7L8L6 764 aaKnown RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 CCDC89Q8N998 374 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 DDHD1Q8NEL9 900 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 UTP15Q8TED0 518 aaKnown RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 SECISBP2LQ93073 1101 aaKnown RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 SERINC2Q96SA4 455 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 CCDC94Q9BW85 323 aaPredicted RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 WDR13Q9H1Z4 485 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 RAD21L1Q9H4I0 556 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 GRPEL1Q9HAV7 217 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 INTS10Q9NVR2 710 aaKnown RBP3.91□□□□□ -1.78
CHD9-212ENST00000564641 CLIC5Q9NZA1 410 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 DLGAP2Q9P1A6 1054 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 CYP46A1Q9Y6A2 500 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 MAU2Q9Y6X3 613 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 CASZ1Q86V15 1759 aa3.91□□□□□ -1.78
CHD9-212ENST00000564641 NFAT5O94916 1531 aa3.9□□□□□ -1.78
CHD9-212ENST00000564641 COL18A1P39060 1754 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 RGPD5Q99666 1765 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 UQCRHLA0A096LP55 91 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 EIF4E1BA6NMX2 242 aaKnown RBP3.9□□□□□ -1.79
CHD9-212ENST00000564641 VGLL3A8MV65 326 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 F9P00740 461 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 UQCRHP07919 91 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 HSP90AB1P08238 724 aaKnown RBP3.9□□□□□ -1.79
CHD9-212ENST00000564641 PRCPP42785 496 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 C1QTNF8P60827 252 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 CCDC173Q0VFZ6 552 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 LPAL2Q16609 132 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 KIAA1644Q3SXP7 199 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 ZFP69Q49AA0 526 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 CXorf66Q5JRM2 361 aaPredicted RBP3.9□□□□□ -1.79
CHD9-212ENST00000564641 FAM69AQ5T7M9 428 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 ZNF790Q6PG37 636 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 TSSK4Q6SA08 328 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 PLXDC2Q6UX71 529 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 Q75L30 129 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 OR1J2Q8NGS2 313 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 ST8SIA4Q92187 359 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 TRIM51Q9BSJ1 452 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 PANK2Q9BZ23 570 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 TMEM39BQ9GZU3 492 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 FGF22Q9HCT0 170 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 OLA1Q9NTK5 396 aaKnown RBP3.9□□□□□ -1.79
CHD9-212ENST00000564641 NSMCE4AQ9NXX6 385 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 BTAF1O14981 1849 aa3.9□□□□□ -1.79
CHD9-212ENST00000564641 FLT4P35916 1363 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 KANSL1LA0AUZ9 987 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 SLCO1B7G3V0H7 640 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 DAB1O75553 588 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 TSHBP01222 138 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 TFAP2AP05549 437 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 HSPA5P11021 654 aaKnown RBP3.89□□□□□ -1.79
CHD9-212ENST00000564641 ATP1A3P13637 1013 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 GNAZP19086 355 aa3.89□□□□□ -1.79
CHD9-212ENST00000564641 PTMSP20962 102 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms