RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 OR52A5Q9H2C5 316 aa12.54□□□□□ -0.4
CLK3-214ENST00000564096 RDH14Q9HBH5 336 aa12.54□□□□□ -0.4
CLK3-214ENST00000564096 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
CLK3-214ENST00000564096 CD274Q9NZQ7 290 aa12.54□□□□□ -0.4
CLK3-214ENST00000564096 PCYT1BQ9Y5K3 369 aaPredicted RBP12.54□□□□□ -0.4
CLK3-214ENST00000564096 HEBP2Q9Y5Z4 205 aa12.54□□□□□ -0.4
CLK3-214ENST00000564096 HRO43593 1189 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 GPR37L1O60883 481 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 PSIP1O75475 530 aaKnown RBP12.53□□□□□ -0.4
CLK3-214ENST00000564096 MATN4O95460 622 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 WNT1P04628 370 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 JUNDP17535 347 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 WDR4P57081 412 aaKnown RBP12.53□□□□□ -0.4
CLK3-214ENST00000564096 NAA20P61599 178 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 HNRNPKP61978 463 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLK3-214ENST00000564096 CDKL1Q00532 357 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 CTBSQ01459 385 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 EIF2B5Q13144 721 aaKnown RBP12.53□□□□□ -0.4
CLK3-214ENST00000564096 PCLAFQ15004 111 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 ELOCQ15369 112 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 TGFBIQ15582 683 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 PDK4Q16654 411 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 PPP1R3AQ16821 1122 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 CDKL4Q5MAI5 379 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 LIPMQ5VYY2 423 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 ATG16L1Q676U5 607 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 SBSNQ6UWP8 590 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 LAYNQ6UX15 382 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 VRK3Q8IV63 474 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 DCUN1D3Q8IWE4 304 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 LILRA3Q8N6C8 439 aaPredicted RBP12.53□□□□□ -0.4
CLK3-214ENST00000564096 AVL9Q8NBF6 648 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 CEP76Q8TAP6 659 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 ASB11Q8WXH4 323 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 MAGEB18Q96M61 343 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 PRRX2Q99811 253 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 SLC12A9Q9BXP2 914 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 C12orf65Q9H3J6 166 aaKnown RBP12.53□□□□□ -0.4
CLK3-214ENST00000564096 PARVBQ9HBI1 364 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 SPASTQ9UBP0 616 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 GULP1Q9UBP9 304 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 SLC23A2Q9UGH3 650 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 RAB23Q9ULC3 237 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 ASF1AQ9Y294 204 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 SLCO1B1Q9Y6L6 691 aa12.53□□□□□ -0.4
CLK3-214ENST00000564096 A8MT66 165 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 G3V2L1 256 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 STX16-NPEPL1H3BU86 382 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 UBXN8O00124 270 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 STX16O14662 325 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 YKT6O15498 198 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 FFAR2O15552 330 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 TRIM13O60858 407 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 CSF2P04141 144 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 ANXA5P08758 320 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 GRK2P25098 689 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 SERPINB5P36952 375 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 ARRB1P49407 418 aaPredicted RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 CSNK1EP49674 416 aaKnown RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 HNMTP50135 292 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 ALDH18A1P54886 795 aaKnown RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 GUCY1A3Q02108 690 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 ABRQ12979 859 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 UAP1L1Q3KQV9 507 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 CFAP157Q5JU67 520 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 PEAR1Q5VY43 1037 aaPredicted RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 SLC30A9Q6PML9 568 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 WASH2PQ6VEQ5 465 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 CYHR1Q6ZMK1 362 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 GKN2Q86XP6 184 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 PTGR2Q8N8N7 351 aaPredicted RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 PDPRQ8NCN5 879 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 FBXO15Q8NCQ5 510 aaPredicted RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 PHC3Q8NDX5 983 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 CFAP61Q8NHU2 1237 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 ATL1Q8WXF7 558 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 PIGKQ92643 395 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 RMDN2Q96LZ7 410 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 WWP1Q9H0M0 922 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 TMEM168Q9H0V1 697 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 TRIT1Q9H3H1 467 aaKnown RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 ERVMER34-1Q9H9K5 563 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 WASH6PQ9NQA3 447 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 OXSMQ9NWU1 459 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 ARL15Q9NXU5 204 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 UTP6Q9NYH9 597 aaKnown RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 WWOXQ9NZC7 414 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 NCKIPSDQ9NZQ3 722 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 SIRPGQ9P1W8 387 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 PILRBQ9UKJ0 227 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 ADAMTS6Q9UKP5 1117 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 DOLKQ9UPQ8 538 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 TNPO3Q9Y5L0 923 aaKnown RBP12.52□□□□□ -0.41
CLK3-214ENST00000564096 NCOR1O75376 2440 aa12.52□□□□□ -0.41
CLK3-214ENST00000564096 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
CLK3-214ENST00000564096 A0A1B0GVT2 93 aa12.51□□□□□ -0.41
CLK3-214ENST00000564096 WDR91A4D1P6 747 aa12.51□□□□□ -0.41
CLK3-214ENST00000564096 NCF1BA6NI72 391 aaPredicted RBP12.51□□□□□ -0.41
CLK3-214ENST00000564096 PRR19A6NJB7 356 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms