RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SH3BP2P78314 561 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 GALNT2Q10471 571 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 SMARCB1Q12824 385 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 SPANXN4Q5MJ08 99 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 NOL9Q5SY16 702 aaKnown RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 C2CD4AQ8NCU7 369 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 ZFP90Q8TF47 636 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 RANBP9Q96S59 729 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 PCYT2Q99447 389 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 TFB2MQ9H5Q4 396 aaKnown RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 PAK1IP1Q9NWT1 392 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 PKD1L3Q7Z443 1732 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 CSF2P04141 144 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 DARSP14868 501 aaKnown RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 KCNA5P22460 613 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 CPT1AP50416 773 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 ABATP80404 500 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 CD47Q08722 323 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 UNC50Q53HI1 259 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 SYCE2Q6PIF2 218 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 RNF111Q6ZNA4 994 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 TCAIMQ8N3R3 496 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 LRRC17Q8N6Y2 441 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 TBC1D15Q8TC07 691 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 CORO1BQ9BR76 489 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 NUSAP1Q9BXS6 441 aaKnown RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 C1orf109Q9NX04 203 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 ERVK-11Q9UQG0 969 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 PLK4O00444 970 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 FPGTO14772 594 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 DFNA5O60443 496 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 SLC25A14O95258 325 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 CHRNA1P02708 482 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 MT-ND2P03891 347 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 SMIM10L2AP0DMW4 78 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 SMIM10L2BP0DMW5 78 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 FEN1P39748 380 aaKnown RBP12.41□□□□□ -0.42
COMMD4-209ENST00000564068 FOXM1Q08050 763 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 LRP8Q14114 963 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 ZNF789Q5FWF6 425 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 PLEKHG7Q6ZR37 379 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 CILP2Q8IUL8 1156 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 MINDY1Q8N5J2 469 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 TMCO6Q96DC7 493 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 TMEM246Q9BRR3 403 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 EBPLQ9BY08 206 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 PDLIM7Q9NR12 457 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 ARMC1Q9NVT9 282 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 FAM118AQ9NWS6 357 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 FKBPLQ9UIM3 349 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 SESN1Q9Y6P5 492 aa12.41□□□□□ -0.42
COMMD4-209ENST00000564068 J3KR12 359 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PPP6CO00743 305 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CASKO14936 926 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 KPNA6O60684 536 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CNTN5O94779 1100 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CYP2A7P20853 494 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 AGXTP21549 392 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 MATN1P21941 496 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
COMMD4-209ENST00000564068 TIE1P35590 1138 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 ANGPT1Q15389 498 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CACTIN-AS1Q8N1I8 211 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 RTL3Q8N8U3 475 aaKnown RBP12.4□□□□□ -0.42
COMMD4-209ENST00000564068 GRPEL2Q8TAA5 225 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 SH3YL1Q96HL8 342 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-209ENST00000564068 AGO1Q9UL18 857 aaKnown RBP12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CPQQ9Y646 472 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 NRCAMQ92823 1304 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CNTRLQ7Z7A1 2325 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PER2O15055 1255 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 RFPL2O75678 378 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 STK16O75716 305 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PAX3P23760 479 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CLCNKBP51801 687 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PFKPQ01813 784 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 TUBB3Q13509 450 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 KCNJ8Q15842 424 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 C6orf136Q5SQH8 315 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 ZNF517Q6ZMY9 492 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-209ENST00000564068 TMEM199Q8N511 208 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PSD4Q8NDX1 1056 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 ACDQ96AP0 544 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 LRCH3Q96II8 777 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 ABHD16BQ9H3Z7 469 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 AASSQ9UDR5 926 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 PRRG1O14668 218 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 NOS1APO75052 506 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-209ENST00000564068 CREG1O75629 220 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 EPORP19235 508 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 GDF5P43026 501 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 HSF5Q4G112 596 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-209ENST00000564068 UBE2UQ5VVX9 321 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 OR2T5Q6IEZ7 315 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 LCN8Q6JVE9 175 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 ADGRG5Q8IZF4 528 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 NPWQ8N729 165 aa12.4□□□□□ -0.42
COMMD4-209ENST00000564068 OR2T29Q8NH02 315 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms