RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 MYO1HQ8N1T3 1032 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 ACVR1CQ8NER5 493 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 DEFB124Q8NES8 71 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 BAHD1Q8TBE0 780 aaPredicted RBP18.38■□□□□ 0.53
RAB40C-207ENST00000563109 TFGQ92734 400 aaPredicted RBP18.38■□□□□ 0.53
RAB40C-207ENST00000563109 SH3KBP1Q96B97 665 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 INSM2Q96T92 566 aaPredicted RBP18.38■□□□□ 0.53
RAB40C-207ENST00000563109 DHRS4Q9BTZ2 278 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 CAB39LQ9H9S4 337 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 SYTL2Q9HCH5 934 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 GPAMQ9HCL2 828 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 ASF1AQ9Y294 204 aa18.38■□□□□ 0.53
RAB40C-207ENST00000563109 CFAP20Q9Y6A4 193 aaKnown RBP18.38■□□□□ 0.53
RAB40C-207ENST00000563109 LAMA1P25391 3075 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 IQANK1A0A1B0GTG1 560 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 CPED1A4D0V7 1026 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 ZW10O43264 779 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 NUDT21O43809 227 aaKnown RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 MPC1LP0DKB6 136 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 GLB1P16278 677 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 CRABP2P29373 138 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 UBE2IP63279 158 aaKnown RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 TIAL1Q01085 375 aaKnown RBP eCLIP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 ABRQ12979 859 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 RSPO4Q2I0M5 234 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 DUS1LQ6P1R4 473 aaKnown RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 ADGRD1Q6QNK2 874 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 UNC5DQ6UXZ4 953 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 NKAPQ8N5F7 415 aaKnown RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 CFAP61Q8NHU2 1237 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 HNRNPLLQ8WVV9 542 aaKnown RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 MTBPQ96DY7 904 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 LINGO1Q96FE5 620 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 FERD3LQ96RJ6 166 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 TRIT1Q9H3H1 467 aaKnown RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 MVB12BQ9H7P6 319 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 ZNF624Q9P2J8 865 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 LRIT1Q9P2V4 623 aa18.37■□□□□ 0.53
RAB40C-207ENST00000563109 RIF1Q5UIP0 2472 aaKnown RBP18.37■□□□□ 0.53
RAB40C-207ENST00000563109 LY6G6EA0A0G2JKS1 128 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 SMIM23A6NLE4 172 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 KDM1AO60341 852 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 SNRPAP09012 282 aaKnown RBP18.36■□□□□ 0.53
RAB40C-207ENST00000563109 MYF5P13349 255 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 ZNF37AP17032 561 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-207ENST00000563109 ACADLP28330 430 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 SLC19A1P41440 591 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 ZNF460Q14592 562 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 ZKSCAN8Q15776 578 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-207ENST00000563109 TAF1BQ53T94 588 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-207ENST00000563109 GUSBP11Q6P575 273 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 TTC23LQ6PF05 361 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 EFL1Q7Z2Z2 1120 aaKnown RBP18.36■□□□□ 0.53
RAB40C-207ENST00000563109 CCDC91Q7Z6B0 441 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 CEP97Q8IW35 865 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 IFI44Q8TCB0 444 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 CCDC74AQ96AQ1 378 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 SLC38A3Q99624 504 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 RTKNQ9BST9 563 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 PLAAQ9Y263 795 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 RNF215Q9Y6U7 377 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 U3KQA8 63 aa18.36■□□□□ 0.53
RAB40C-207ENST00000563109 ARID1BQ8NFD5 2236 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-207ENST00000563109 ZNF292O60281 2723 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 EME2A4GXA9 379 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-207ENST00000563109 TRIM49D1C9J1S8 452 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 PHGDHO43175 533 aaKnown RBP18.35■□□□□ 0.53
RAB40C-207ENST00000563109 PNLIPP16233 465 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 ACP1P24666 158 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 GCAP28676 217 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 SLCO1A2P46721 670 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 DNAJC3Q13217 504 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 PLCL1Q15111 1095 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 TRIP6Q15654 476 aaKnown RBP18.35■□□□□ 0.53
RAB40C-207ENST00000563109 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-207ENST00000563109 CMC1Q7Z7K0 106 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 TDRPQ86YL5 185 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 TBC1D21Q8IYX1 336 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 EPS8L3Q8TE67 593 aaKnown RBP18.35■□□□□ 0.53
RAB40C-207ENST00000563109 EEF1AKMT1Q8WVE0 214 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 ZFPM2Q8WW38 1151 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 HGH1Q9BTY7 390 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 UCK1Q9HA47 277 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 SLC40A1Q9NP59 571 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 SNX15Q9NRS6 342 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 POLG2Q9UHN1 485 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 TLK1Q9UKI8 766 aa18.35■□□□□ 0.53
RAB40C-207ENST00000563109 GVINP1Q7Z2Y8 2422 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 A0A087X1B8 175 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 PABPN1LA6NDY0 278 aaKnown RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 RASGRF2O14827 1237 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 CDH16O75309 829 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 TCEA3O75764 348 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 CATP04040 527 aaKnown RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 TYK2P29597 1187 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 CCNFP41002 786 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 PPM1FP49593 454 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-207ENST00000563109 PGGT1BP53609 377 aa18.34■□□□□ 0.53
RAB40C-207ENST00000563109 BEND6Q5SZJ8 279 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms