RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MORF4L2Q15014 288 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 ANKRD20A4Q4UJ75 823 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 SDCCAG8Q86SQ7 713 aaPredicted RBP16.16■□□□□ 0.18
CDT1-202ENST00000562747 LDB1Q86U70 411 aaPredicted RBP16.16■□□□□ 0.18
CDT1-202ENST00000562747 LRRC6Q86X45 466 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 ZFAND4Q86XD8 727 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 PLXDC1Q8IUK5 500 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 OTUD6BQ8N6M0 293 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 SPATA4Q8NEY3 305 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
CDT1-202ENST00000562747 ELMO1Q92556 727 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 SIGLEC10Q96LC7 697 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 TCF12Q99081 682 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 KRT12Q99456 494 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 STARD5Q9NSY2 213 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 RPS6KL1Q9Y6S9 549 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 COLEC10Q9Y6Z7 277 aa16.16■□□□□ 0.18
CDT1-202ENST00000562747 IFRD1O00458 451 aaPredicted RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 TERTO14746 1132 aaKnown RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 NDC80O14777 642 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 NVLO15381 856 aaKnown RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 NDUFS3O75489 264 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 FAM87AP0C7U9 286 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 JMJD7P0C870 316 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 AMD1P17707 334 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 OGNP20774 298 aaKnown RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 RPS3P23396 243 aaKnown RBP eCLIP16.15■□□□□ 0.18
CDT1-202ENST00000562747 CSRP3P50461 194 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 TYSND1Q2T9J0 566 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 DNAJC21Q5F1R6 531 aaKnown RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 RNF187Q5TA31 235 aaPredicted RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 AGGF1Q8N302 714 aaeCLIP16.15■□□□□ 0.18
CDT1-202ENST00000562747 ZNF669Q96BR6 464 aaPredicted RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 TRIM51Q9BSJ1 452 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 CARD6Q9BX69 1037 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 FAM117AQ9C073 453 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 P2RY12Q9H244 342 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 OGFRQ9NZT2 677 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 TMEM9Q9P0T7 183 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 PCDHGA4Q9Y5G9 962 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 HEMK1Q9Y5R4 338 aaPredicted RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 CFAP20Q9Y6A4 193 aaKnown RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 MAD1L1Q9Y6D9 718 aa16.15■□□□□ 0.18
CDT1-202ENST00000562747 MN1Q10571 1320 aaPredicted RBP16.15■□□□□ 0.18
CDT1-202ENST00000562747 ZCWPW2A0A1B0GU75 182 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 SLC5A10A0PJK1 596 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 C9orf172C9J069 976 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 C9P02748 559 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 TYRP1P17643 537 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 CAPZBP47756 277 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 CYP4F2P78329 520 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 C16orf72Q14CZ0 275 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 PLCL1Q15111 1095 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 HIBCHQ6NVY1 386 aaPredicted RBP16.14■□□□□ 0.17
CDT1-202ENST00000562747 KLHL35Q6PF15 583 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 LMNTD2Q8IXW0 634 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 AGBL5Q8NDL9 886 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 RCBTB1Q8NDN9 531 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 STAMBPL1Q96FJ0 436 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 SNF8Q96H20 258 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 C16orf45Q96MC5 204 aaPredicted RBP16.14■□□□□ 0.17
CDT1-202ENST00000562747 PANX3Q96QZ0 392 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 TRIM56Q9BRZ2 755 aaKnown RBP16.14■□□□□ 0.17
CDT1-202ENST00000562747 NAT9Q9BTE0 207 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 RAB33BQ9H082 229 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 KIR3DX1Q9H7L2 352 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 EPHA6Q9UF33 1036 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 IL17BQ9UHF5 180 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 GNPTGQ9UJJ9 305 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 VPS9D1Q9Y2B5 631 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 SPTA1P02549 2419 aa16.14■□□□□ 0.17
CDT1-202ENST00000562747 SDK2Q58EX2 2172 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 FAM187AA6NFU0 413 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 EFCAB8A8MWE9 144 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 GOLGA8KD6RF30 607 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 GOLGA8TH3BQL2 631 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 SEC31AO94979 1220 aaKnown RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 TTC4O95801 387 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 ITGB2P05107 769 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 PGAM1P18669 254 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 MPSTP25325 297 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 PDHA2P29803 388 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 CSTF2P33240 577 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDT1-202ENST00000562747 PREPP48147 710 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 ADARP55265 1226 aaKnown RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 DHX9Q08211 1270 aaKnown RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 THOC5Q13769 683 aaKnown RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 BOP1Q14137 746 aaKnown RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 KRT33BQ14525 404 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 LONRF1Q17RB8 773 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 SYTL3Q4VX76 610 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 PTRHD1Q6GMV3 140 aaKnown RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 NEPROQ6NW34 567 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 DUS1LQ6P1R4 473 aaKnown RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 ZNF572Q7Z3I7 529 aaPredicted RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 MAATS1Q7Z4T9 603 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 ARHGAP22Q7Z5H3 698 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 CILP2Q8IUL8 1156 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 PDIK1LQ8N165 341 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 RSC1A1Q92681 617 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms