RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 PANX3Q96QZ0 392 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 CTRCQ99895 268 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 DDA1Q9BW61 102 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 CARD6Q9BX69 1037 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 RAB33BQ9H082 229 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 ZNF768Q9H5H4 540 aaKnown RBP15.71■□□□□ 0.11
COMMD4-206ENST00000562610 MVB12BQ9H7P6 319 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 HRASLS2Q9NWW9 162 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 RNF14Q9UBS8 474 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 ACSL6Q9UKU0 697 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 ASF1AQ9Y294 204 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 B3GALT1Q9Y5Z6 326 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 PTPRQQ9UMZ3 2332 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 SLC5A10A0PJK1 596 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 MAGEB16A2A368 324 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 GSAPA4D1B5 854 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 TOX3O15405 576 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-206ENST00000562610 TTI1O43156 1089 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 APOA4P06727 396 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 RPS3P23396 243 aaKnown RBP eCLIP15.7■□□□□ 0.19e-8■■■■□ 25.4
COMMD4-206ENST00000562610 CD82P27701 267 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 CCR7P32248 378 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 TMPRSS3P57727 454 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 PLOD1Q02809 727 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-206ENST00000562610 FOXM1Q08050 763 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 PRKAA1Q13131 559 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 THOC5Q13769 683 aaKnown RBP15.7■□□□□ 0.1
COMMD4-206ENST00000562610 TYSND1Q2T9J0 566 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 ANKRD20A4Q4UJ75 823 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 ZNF470Q6ECI4 717 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 HOOK3Q86VS8 718 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 LRRC6Q86X45 466 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 BMPERQ8N8U9 685 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 OR52E1Q8NGJ3 308 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 OR5AR1Q8NGP9 310 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 FCRL3Q96P31 734 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-206ENST00000562610 KRT12Q99456 494 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 ASPSCR1Q9BZE9 553 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 TRIM31Q9BZY9 425 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 B3GNT4Q9C0J1 378 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 P2RY12Q9H244 342 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 TRIT1Q9H3H1 467 aaKnown RBP15.7■□□□□ 0.1
COMMD4-206ENST00000562610 SRMSQ9H3Y6 488 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 EPHA6Q9UF33 1036 aa15.7■□□□□ 0.1
COMMD4-206ENST00000562610 AHCTF1Q8WYP5 2266 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 TLCD2A6NGC4 264 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 STMND1H3BQB6 276 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 BANF1O75531 89 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 USP1O94782 785 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 POLR2CP19387 275 aaPredicted RBP15.69■□□□□ 0.1
COMMD4-206ENST00000562610 FMO4P31512 558 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 ARL4DP49703 201 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 UCNP55089 124 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 ETF1P62495 437 aaKnown RBP15.69■□□□□ 0.1
COMMD4-206ENST00000562610 CXADRP78310 365 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 MC2RQ01718 297 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 DHX9Q08211 1270 aaKnown RBP15.69■□□□□ 0.1
COMMD4-206ENST00000562610 TGIF1Q15583 401 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 LONRF1Q17RB8 773 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 CTSL3PQ5NE16 218 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 NEPROQ6NW34 567 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 CEACAM20Q6UY09 585 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 TMEM135Q86UB9 458 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 SLC22A15Q8IZD6 547 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 AGGF1Q8N302 714 aaeCLIP15.69■□□□□ 0.1
COMMD4-206ENST00000562610 GSDMBQ8TAX9 411 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 ASZ1Q8WWH4 475 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 LPGAT1Q92604 370 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 SIGLEC10Q96LC7 697 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 MAP3K3Q99759 626 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 APMAPQ9HDC9 416 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 C20orf96Q9NUD7 363 aaPredicted RBP15.69■□□□□ 0.1
COMMD4-206ENST00000562610 SIDT1Q9NXL6 827 aaKnown RBP15.69■□□□□ 0.1
COMMD4-206ENST00000562610 CRYL1Q9Y2S2 319 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 TDRKHQ9Y2W6 561 aaKnown RBP15.69■□□□□ 0.1
COMMD4-206ENST00000562610 PCDHB11Q9Y5F2 797 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 PCDHGA3Q9Y5H0 932 aa15.69■□□□□ 0.1
COMMD4-206ENST00000562610 ZCWPW2A0A1B0GU75 182 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 BHMG1C9JSJ3 638 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-206ENST00000562610 POLR1CO15160 346 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-206ENST00000562610 NIPSNAP2O75323 286 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 F7P08709 466 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-206ENST00000562610 PGAM1P18669 254 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 SH3BP2P78314 561 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 MORF4L2Q15014 288 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 BBS9Q3SYG4 887 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 DNAJC21Q5F1R6 531 aaKnown RBP15.68■□□□□ 0.1
COMMD4-206ENST00000562610 OTOAQ7RTW8 1153 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 CILP2Q8IUL8 1156 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 VRK3Q8IV63 474 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.68■□□□□ 0.1
COMMD4-206ENST00000562610 CFAP61Q8NHU2 1237 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 SKA2Q8WVK7 121 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-206ENST00000562610 UBXN4Q92575 508 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 FAM136AQ96C01 138 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 SNF8Q96H20 258 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 TEFMQ96QE5 360 aaKnown RBP15.68■□□□□ 0.1
COMMD4-206ENST00000562610 OR6C1Q96RD1 312 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 TCF12Q99081 682 aa15.68■□□□□ 0.1
COMMD4-206ENST00000562610 CD180Q99467 661 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms