RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PRDX3P30048 256 aaKnown RBP11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 CDKN1CP49918 316 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 RRADP55042 308 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 ADCY2Q08462 1091 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 WASHC5Q12768 1159 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 PRKAA1Q13131 559 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 BRD3Q15059 726 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 PDK1Q15118 436 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 ZIC1Q15915 447 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 LYPLAL1Q5VWZ2 237 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 SLC9A4Q6AI14 798 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 FJX1Q86VR8 437 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 RAB43Q86YS6 212 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 TICAM1Q8IUC6 712 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 DTWD1Q8N5C7 304 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 METTL27Q8N6F8 245 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 AMER2Q8N7J2 671 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 TMEM102Q8N9M5 508 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 GLIS1Q8NBF1 620 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 TTC13Q8NBP0 860 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 CLEC1AQ8NC01 280 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 OR13C4Q8NGS5 318 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 UBE2Q2Q8WVN8 375 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 TRAPPC9Q96Q05 1148 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 CD180Q99467 661 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 FICDQ9BVA6 458 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 ZCCHC2Q9C0B9 1178 aaKnown RBP11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 GOLPH3Q9H4A6 298 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 ZNF552Q9H707 407 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 KLHL8Q9P2G9 620 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 PCNX1Q96RV3 2341 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 CCDC78A2IDD5 438 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 MGAT4DA6NG13 374 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 PRSS44E7EML9 344 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 E7EQ34 232 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 PPP1R12AO14974 1030 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 ITGA3P26006 1051 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 GRNP28799 593 aaKnown RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 HMGCLP35914 325 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 FOLR3P41439 243 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 NR1I3Q14994 352 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 SLC1A5Q15758 541 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 TEX44Q53QW1 395 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 DCAF10Q5QP82 559 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 ZNF385CQ66K41 422 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 MFSD7Q6UXD7 560 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 BPHLQ86WA6 291 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 ZNF567Q8N184 647 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 ZNF655Q8N720 491 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 OR4K2Q8NGD2 314 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 OR52E1Q8NGJ3 308 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 ZNF398Q8TD17 642 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 BRSK1Q8TDC3 778 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 N4BP2L2Q92802 583 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 TEKT5Q96M29 485 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 ASB8Q9H765 288 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 P4HTMQ9NXG6 502 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 IFT80Q9P2H3 777 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 FAM153AQ9UHL3 310 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 GPN3Q9UHW5 284 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 PKP3Q9Y446 797 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 PCDHGB7Q9Y5F8 929 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 PCDHGA10Q9Y5H3 936 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 HIVEP1P15822 2718 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
NSMCE1-202ENST00000561960 PKDREJQ9NTG1 2253 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 STX7O15400 261 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 OR2B3O76000 313 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 F10P00742 488 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 UMODP07911 640 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 MYBPC3Q14896 1274 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 PRKD1Q15139 912 aaPredicted RBP11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 LONRF2Q1L5Z9 754 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 LUZP1Q86V48 1076 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 MCEMP1Q8IX19 187 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 PARP9Q8IXQ6 854 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 ZADH2Q8N4Q0 377 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 C2orf73Q8N5S3 287 aaPredicted RBP11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 OR2L2Q8NH16 312 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 OR8K5Q8NH50 307 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 GRHL3Q8TE85 626 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 CTNNBL1Q8WYA6 563 aaPredicted RBP11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 GBP5Q96PP8 586 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 FAM118BQ9BPY3 351 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 GORASP1Q9BQQ3 440 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 LATS2Q9NRM7 1088 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 C1GALT1Q9NS00 363 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 SPHK1Q9NYA1 384 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 ACTR10Q9NZ32 417 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 NDOR1Q9UHB4 597 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 SH3BGRL2Q9UJC5 107 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 SERTAD3Q9UJW9 196 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 ITGB1BP2Q9UKP3 347 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 NENFQ9UMX5 172 aa11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 NOVA2Q9UNW9 492 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-202ENST00000561960 NF1P21359 2839 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 LOC285095A0A1B0GVY8 99 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms