RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 FAM136AQ96C01 138 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 C9orf72Q96LT7 481 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 DPH5Q9H2P9 285 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 OCIAD1Q9NX40 245 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 ASF1AQ9Y294 204 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 FAM169AQ9Y6X4 670 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 EFCAB7A8K855 629 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 BHMG1C9JSJ3 638 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 SMAPO00193 183 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 KIF1CO43896 1103 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 C9P02748 559 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 FGF3P11487 239 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 MLLT3P42568 568 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 SLC1A2P43004 574 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 PLOD1Q02809 727 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 CKAP4Q07065 602 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 TMED2Q15363 201 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 HSP90AA5PQ58FG0 334 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 ZNF789Q5FWF6 425 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 OOSP2Q86WS3 158 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 VRK3Q8IV63 474 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 IGDCC3Q8IVU1 814 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 OR4E2Q8NGC2 313 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 OR5AR1Q8NGP9 310 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 ZFPM2Q8WW38 1151 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 ASZ1Q8WWH4 475 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 ZDHHC12Q96GR4 267 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 BIRC8Q96P09 236 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 FBXO6Q9NRD1 293 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 CDC23Q9UJX2 597 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 CHMP2BQ9UQN3 213 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 ZFHX4Q86UP3 3567 aa19.39■□□□□ 0.7
TSPAN3-210ENST00000561277 OR6C74A6NCV1 312 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 TP73O15350 636 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 NIPSNAP2O75323 286 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 ACADLP28330 430 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 SLC5A2P31639 672 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 EIF2S3P41091 472 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 ELK3P41970 407 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 SEPHS1P49903 392 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 ARL4CP56559 192 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 OTOAQ7RTW8 1153 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 CLEC14AQ86T13 490 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 KCNMB4Q86W47 210 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 OR52E1Q8NGJ3 308 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 CALML6Q8TD86 181 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 LCN9Q8WX39 176 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 USP7Q93009 1102 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 ART4Q93070 314 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 CFAP36Q96G28 342 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 NRTNQ99748 197 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 ERP44Q9BS26 406 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 MVB12BQ9H7P6 319 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 IARS2Q9NSE4 1012 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 INTS10Q9NVR2 710 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 HRASLS2Q9NWW9 162 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 CDYLQ9Y232 598 aa19.39■□□□□ 0.69
TSPAN3-210ENST00000561277 OR5K3A6NET4 321 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 PRAMEF10O60809 474 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 TTC4O95801 387 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 ESR1P03372 595 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 ERVK-10P10266 1014 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 AOAHP28039 575 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 CALCOCO2Q13137 446 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 SPANXN3Q5MJ09 141 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 CACHD1Q5VU97 1274 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 SLC22A15Q8IZD6 547 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 ZNF248Q8NDW4 579 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 GSDMBQ8TAX9 411 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 PMEPA1Q969W9 287 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 WDR83Q9BRX9 315 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 FAM167BQ9BTA0 163 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 NAT9Q9BTE0 207 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 SRMSQ9H3Y6 488 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 XKR8Q9H6D3 395 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 WDR70Q9NW82 654 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 FOXJ2Q9P0K8 574 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 VPS9D1Q9Y2B5 631 aa19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 TDRKHQ9Y2W6 561 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-210ENST00000561277 URB1O60287 2271 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 C9orf172C9J069 976 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 RRP8O43159 456 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 GPC4O75487 556 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 S1PR4O95977 384 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 MPP1Q00013 466 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 DNTTIP2Q5QJE6 756 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 ARMC6Q6NXE6 501 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 ZNF572Q7Z3I7 529 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 ANKMY2Q8IV38 441 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 BBOF1Q8ND07 529 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 CFAP61Q8NHU2 1237 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 RAB33BQ9H082 229 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 TRIT1Q9H3H1 467 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 SLC39A1Q9NY26 324 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 EPHA6Q9UF33 1036 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 ZC3H7BQ9UGR2 993 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 TSR3Q9UJK0 312 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 PCDHGA7Q9Y5G6 932 aa19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 KMT2BQ9UMN6 2715 aaPredicted RBP19.37■□□□□ 0.69
TSPAN3-210ENST00000561277 E5RI56 91 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms