RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CCNI2Q6ZMN8 369 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 TRMT10CQ7L0Y3 403 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 STRA8Q7Z7C7 330 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 VRK3Q8IV63 474 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 TRIM48Q8IWZ4 208 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 TBC1D21Q8IYX1 336 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 ZBTB2Q8N680 514 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 ACVR1CQ8NER5 493 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 OR5K2Q8NHB8 316 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 FAM45AQ8TCE6 357 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 FBF1Q8TES7 1133 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 INPP5DQ92835 1189 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 GFM1Q96RP9 751 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC38A3Q99624 504 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 CPNE1Q99829 537 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 ABCG4Q9H172 646 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 CDC42EP4Q9H3Q1 356 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 RHOJQ9H4E5 214 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 TFB2MQ9H5Q4 396 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 ANKZF1Q9H8Y5 726 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 KCNK4Q9NYG8 393 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 TAS2R13Q9NYV9 303 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 EPHA6Q9UF33 1036 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC24A2Q9UI40 661 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 CLCA2Q9UQC9 943 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 VWA7Q9Y334 891 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 PRAMEF33A0A0G2JMD5 474 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 TMX2-CTNND1H3BSU7 103 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 MT-CO3P00414 261 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 RPLP0P05388 317 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 MPC1LP0DKB6 136 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 ENO3P13929 434 aaPredicted RBP9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 FDXRP22570 491 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 ALDH4A1P30038 563 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 CCKBRP32239 447 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 GP5P40197 560 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 MAPK9P45984 424 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 CFHR1Q03591 330 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 ZFP36L1Q07352 338 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 TRA2AQ13595 282 aaKnown RBP eCLIP9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 SPIDRQ14159 915 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 BRD3Q15059 726 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 ISXQ2M1V0 245 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 KBTBD12Q3ZCT8 623 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 SYTL3Q4VX76 610 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 RBM20Q5T481 1227 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 HES3Q5TGS1 186 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 HECTD2Q5U5R9 776 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 LRRC8EQ6NSJ5 796 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 WDR93Q6P2C0 686 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 TMEM71Q6P5X7 295 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 NAPRTQ6XQN6 538 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 CYHR1Q6ZMK1 362 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 ZNF574Q6ZN55 896 aaPredicted RBP9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 PIM3Q86V86 326 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 SLITRK4Q8IW52 837 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 CHCHD4Q8N4Q1 142 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 OR4D9Q8NGE8 314 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 OR10G6Q8NH81 332 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 GIMAP7Q8NHV1 300 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 CD200R1Q8TD46 325 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 PDLIM5Q96HC4 596 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 DEPDC7Q96QD5 511 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 FERD3LQ96RJ6 166 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 GPR21Q99679 349 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 RBBP8Q99708 897 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC30A3Q99726 388 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 ACSS3Q9H6R3 686 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 POPDC3Q9HBV1 291 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 IMP3Q9NV31 184 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 OGFRQ9NZT2 677 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 SEMA5BQ9P283 1151 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC17A6Q9P2U8 582 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 FAM8A1Q9UBU6 413 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 POLG2Q9UHN1 485 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 NEUROG3Q9Y4Z2 214 aa9.38□□□□□ -0.91
RABGGTA-221ENST00000561055 MN1Q10571 1320 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 SPTBP11277 2137 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 D6RAR5 112 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 GFYI3L273 518 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 CASC3O15234 703 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 TOX3O15405 576 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 DUX1O43812 170 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 PSIP1O75475 530 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 UBXN7O94888 489 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 WISP3O95389 354 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 C9P02748 559 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 RPN2P04844 631 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 F7P08709 466 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 ABHD2P08910 425 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 FAM153BP0C7A2 387 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 TPBGLP0DKB5 382 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 MYBL2P10244 700 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 SPRP35270 261 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 PDX1P52945 283 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 LIMK2P53671 638 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 CDKN2DP55273 166 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 POU4F1Q01851 419 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 CAMK2BQ13554 666 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 GRB7Q14451 532 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms