RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MAN2B2Q9Y2E5 1009 aa15.76■□□□□ 0.11
SNX1-213ENST00000561026 R3HDM2Q9Y2K5 976 aaKnown RBP15.76■□□□□ 0.11
SNX1-213ENST00000561026 DDX3YO15523 660 aaKnown RBP15.75■□□□□ 0.11
SNX1-213ENST00000561026 RFPL1O75677 317 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PRSS56P0CW18 603 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 CDH3P22223 829 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PRDX3P30048 256 aaKnown RBP15.75■□□□□ 0.11
SNX1-213ENST00000561026 GDF10P55107 478 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 FOXK1P85037 733 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 CACNG1Q06432 222 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 KIF5AQ12840 1032 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 KLRB1Q12918 225 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 RPA4Q13156 261 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 GPS2Q13227 327 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 LAMB3Q13751 1172 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 POU6F1Q14863 301 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 IGFBP7Q16270 282 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 UGT8Q16880 541 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 ZNF449Q6P9G9 518 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PIANPQ8IYJ0 282 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PHC3Q8NDX5 983 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 STYXQ8WUJ0 223 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 THAP4Q8WY91 577 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 LRFN5Q96NI6 719 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 TLR10Q9BXR5 811 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 TFB2MQ9H5Q4 396 aaKnown RBP15.75■□□□□ 0.11
SNX1-213ENST00000561026 MVB12BQ9H7P6 319 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PIH1D1Q9NWS0 290 aaKnown RBP15.75■□□□□ 0.11
SNX1-213ENST00000561026 FARSAQ9Y285 508 aaKnown RBP15.75■□□□□ 0.11
SNX1-213ENST00000561026 PTPN13Q12923 2485 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 GSAPA4D1B5 854 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 MROH6A6NGR9 719 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 BTN3A3O00478 584 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PSMD3O43242 534 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 AP2A2O94973 939 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 AP2A1O95782 977 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 FTCDO95954 541 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 KLK3P07288 261 aaPredicted RBP15.75■□□□□ 0.11
SNX1-213ENST00000561026 GSTM1P09488 218 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 NR1D1P20393 614 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PSMA3P25788 255 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PREPP48147 710 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 RPS18P62269 152 aaKnown RBP15.75■□□□□ 0.11
SNX1-213ENST00000561026 GSTM4Q03013 218 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 SEMA5AQ13591 1074 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 DBN1Q16643 649 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PLEKHS1Q5SXH7 462 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PRAMEF17Q5VTA0 474 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 IZUMO3Q5VZ72 239 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 ASB18Q6ZVZ8 466 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 SYVN1Q86TM6 617 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 TMEM139Q8IV31 216 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 OR52E1Q8NGJ3 308 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 TFGQ92734 400 aaPredicted RBP15.75■□□□□ 0.11
SNX1-213ENST00000561026 MR1Q95460 341 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 NRTNQ99748 197 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 PITPNM3Q9BZ71 974 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 FANCEQ9HB96 536 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 SYTL2Q9HCH5 934 aa15.75■□□□□ 0.11
SNX1-213ENST00000561026 MAST4O15021 2626 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 A0A0U1RQJ8 604 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 TCRBV7S2A1N4TA0A589 114 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 MEN1O00255 615 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 BTN3A1O00481 513 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 MSL3P1P0C860 447 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 GSDMDP57764 484 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 BOP1Q14137 746 aaKnown RBP15.74■□□□□ 0.11
SNX1-213ENST00000561026 AMIGO1Q86WK6 493 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 TXLNBQ8N3L3 684 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 TEX19Q8NA77 164 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 CPT1BQ92523 772 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 HES6Q96HZ4 224 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 ALS2CR12Q96Q35 445 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 CHST8Q9H2A9 424 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 SMARCAL1Q9NZC9 954 aa15.74■□□□□ 0.11
SNX1-213ENST00000561026 SPTBP11277 2137 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 C2orf74A8MZ97 194 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 MAP3K7O43318 606 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 DNAJB5O75953 348 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 ST6GAL1P15907 406 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 RORAP35398 523 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 NSG1P42857 185 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 ABRQ12979 859 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 PRKG2Q13237 762 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 IL10RAQ13651 578 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 ZNF789Q5FWF6 425 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 COLEC12Q5KU26 742 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 LCN10Q6JVE6 187 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 LINC00523Q86TU6 105 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 ADGRF3Q8IZF5 1079 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 DSELQ8IZU8 1212 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 TAB3Q8N5C8 712 aaPredicted RBP15.73■□□□□ 0.11
SNX1-213ENST00000561026 OR1L3Q8NH93 324 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 TRAPPC9Q96Q05 1148 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 DESI2Q9BSY9 194 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 HGH1Q9BTY7 390 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 TRIM55Q9BYV6 548 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 XKR8Q9H6D3 395 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 SERTAD3Q9UJW9 196 aa15.73■□□□□ 0.11
SNX1-213ENST00000561026 PRSS21Q9Y6M0 314 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms