RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PNPLA4P41247 253 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 PRSS36Q5K4E3 855 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 GPRIN3Q6ZVF9 776 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 BHLHA9Q7RTU4 235 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 ASCC1Q8N9N2 400 aaKnown RBP16.21■□□□□ 0.19
TPM1-228ENST00000560975 SETD9Q8NE22 299 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 KIAA1191Q96A73 305 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 OR2B2Q9GZK3 357 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 TRMT13Q9NUP7 481 aaKnown RBP16.21■□□□□ 0.19
TPM1-228ENST00000560975 PCTPQ9UKL6 214 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 SNX6Q9UNH7 406 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 GPSM3Q9Y4H4 160 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 J3KR12 359 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 DIRAS1O95057 198 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 CLCNKBP51801 687 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 SLC10A7Q0GE19 358 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 AGAP6Q5VW22 663 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 NOTUMQ6P988 496 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 IL17RDQ8NFM7 739 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 FCRL2Q96LA5 508 aaPredicted RBP16.21■□□□□ 0.19
TPM1-228ENST00000560975 AGAP4Q96P64 663 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 NUSAP1Q9BXS6 441 aaKnown RBP16.21■□□□□ 0.19
TPM1-228ENST00000560975 C14orf119Q9NWQ9 140 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 UXTQ9UBK9 157 aaPredicted RBP16.21■□□□□ 0.19
TPM1-228ENST00000560975 CDH9Q9ULB4 789 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 GJA3Q9Y6H8 435 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 ZNF236Q9UL36 1845 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 RECQL5O94762 991 aaPredicted RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 GADD45AP24522 165 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 S100A5P33763 92 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 OR2B6P58173 313 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 PTGR1Q14914 329 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 PLEKHG6Q3KR16 790 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 CEP68Q76N32 757 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 NETO1Q8TDF5 533 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 DKK3Q9UBP4 350 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 AGO1Q9UL18 857 aaKnown RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 PIN4Q9Y237 131 aaKnown RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 MROH6A6NGR9 719 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 AGRPO00253 132 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 LDB2O43679 373 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 ONECUT3O60422 494 aaPredicted RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 APBA3O96018 575 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 ARHGAP1Q07960 439 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 GRIK4Q16099 956 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 SNAP47Q5SQN1 464 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 TIGD7Q6NT04 549 aaPredicted RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 SIX5Q8N196 739 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 FBLIM1Q8WUP2 373 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 KLRG1Q96E93 195 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 CATSPERBQ9H7T0 1116 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 ARNT2Q9HBZ2 717 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 OR2A25A4D2G3 310 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 CCRL2O00421 344 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 PRKCAP17252 672 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 JUNDP17535 347 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 KRT20P35900 424 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 SCNN1GP51170 649 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 ZNF135P52742 658 aaPredicted RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 IL18R1Q13478 541 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 RFTN2Q52LD8 501 aaPredicted RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 CARD16Q5EG05 197 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 HIPK1Q86Z02 1210 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 OR56A4Q8NGH8 313 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 OR6F1Q8NGZ6 308 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 METTL6Q8TCB7 284 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 FUBP1Q96AE4 644 aaKnown RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 IMP4Q96G21 291 aaKnown RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 DEPDC7Q96QD5 511 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 AARSD1Q9BTE6 412 aaKnown RBP16.2■□□□□ 0.18
TPM1-228ENST00000560975 AMBNQ9NP70 447 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 PLSCR3Q9NRY6 295 aa16.2■□□□□ 0.18
TPM1-228ENST00000560975 GABRDO14764 452 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 HAT1O14929 419 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 CREG1O75629 220 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 CAPN1P07384 714 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 MSH3P20585 1137 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 DAPP51397 102 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 ERVPABLB-1P60509 514 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 AP5B1Q2VPB7 878 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 FAM174BQ3ZCQ3 159 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 MARCH8Q5T0T0 291 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 SLX4IPQ5VYV7 408 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 NXNL2Q5VZ03 156 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 MRNIPQ6NTE8 343 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 LETMD1Q6P1Q0 360 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 PNCKQ6P2M8 343 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.19■□□□□ 0.18
TPM1-228ENST00000560975 TOP6BLQ8N6T0 577 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 OR8J3Q8NGG0 315 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 ZFYVE19Q96K21 471 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 CCDC115Q96NT0 180 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 CD274Q9NZQ7 290 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 CPA4Q9UI42 421 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 COL1A2P08123 1366 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 CENPBD1B2RD01 187 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 KMOO15229 486 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 ZW10O43264 779 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 APOA1P02647 267 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms