RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CERS6Q6ZMG9 384 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.21□□□□□ -1.42
HERC1-208ENST00000560462 CHERPQ8IWX8 916 aaKnown RBP6.21□□□□□ -1.42
HERC1-208ENST00000560462 SCML4Q8N228 414 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 PELI3Q8N2H9 469 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 LIX1Q8N485 282 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 OR2AP1Q8NGE2 309 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 IRGQQ8WZA9 623 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 RSC1A1Q92681 617 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 VOPP1Q96AW1 172 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 SIGLEC12Q96PQ1 595 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 HERPUD2Q9BSE4 406 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 TRIM51Q9BSJ1 452 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 ACSS3Q9H6R3 686 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 ZNF696Q9H7X3 374 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 ACTR5Q9H9F9 607 aaPredicted RBP6.21□□□□□ -1.42
HERC1-208ENST00000560462 UCK1Q9HA47 277 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 TBC1D7Q9P0N9 293 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 SEMA5BQ9P283 1151 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 B4GALT6Q9UBX8 382 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 LPAR3Q9UBY5 353 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 TBC1D29Q9UFV1 150 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 NOCTQ9UK39 431 aaKnown RBP6.21□□□□□ -1.42
HERC1-208ENST00000560462 VANGL2Q9ULK5 521 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 SLC17A4Q9Y2C5 497 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 ZKSCAN5Q9Y2L8 839 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 MRPS2Q9Y399 296 aaKnown RBP6.21□□□□□ -1.42
HERC1-208ENST00000560462 PCM1Q15154 2024 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 SEC16AO15027 2179 aa6.21□□□□□ -1.42
HERC1-208ENST00000560462 SLC9B1P1A6NJY1 282 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 CLCA1A8K7I4 914 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 KDM4EB2RXH2 506 aaPredicted RBP6.2□□□□□ -1.42
HERC1-208ENST00000560462 MTA2O94776 668 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 MATN4O95460 622 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 GSRP00390 522 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 GSNP06396 782 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 GJB2P29033 226 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 MMP12P39900 470 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 CASP5P51878 434 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 SNRPD1P62314 119 aaKnown RBP6.2□□□□□ -1.42
HERC1-208ENST00000560462 HSD11B2P80365 405 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 PMPCAQ10713 525 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 ABRQ12979 859 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 ZFYVE27Q5T4F4 411 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 DOK6Q6PKX4 331 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 TMEM26Q6ZUK4 368 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 B4GALNT4Q76KP1 1039 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 SETD3Q86TU7 594 aaPredicted RBP6.2□□□□□ -1.42
HERC1-208ENST00000560462 TAC4Q86UU9 113 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 CD163Q86VB7 1156 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 ZNF354CQ86Y25 554 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 KMT5CQ86Y97 462 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 ZC3H7AQ8IWR0 971 aaKnown RBP6.2□□□□□ -1.42
HERC1-208ENST00000560462 PPIL6Q8IXY8 311 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 D2HGDHQ8N465 521 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 ZNF775Q96BV0 537 aaPredicted RBP6.2□□□□□ -1.42
HERC1-208ENST00000560462 TEX101Q9BY14 249 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 SLC7A5P2Q9GIP4 190 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 EMC7Q9NPA0 242 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 GPATCH2LQ9NWQ4 482 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 GFOD1Q9NXC2 390 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 EPHA6Q9UF33 1036 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 ASB1Q9Y576 335 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 ABCA1O95477 2261 aa6.2□□□□□ -1.42
HERC1-208ENST00000560462 OR5K4A6NMS3 321 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 SHISA8B8ZZ34 492 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 IFRD1O00458 451 aaPredicted RBP6.19□□□□□ -1.42
HERC1-208ENST00000560462 ZMPSTE24O75844 475 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 SNUPNO95149 360 aaKnown RBP6.19□□□□□ -1.42
HERC1-208ENST00000560462 GOSR1O95249 250 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 VNN1O95497 513 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 STATHP02808 62 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 UMODP07911 640 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 ELFN1P0C7U0 828 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 F3P13726 295 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 SRD5A1P18405 259 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 CYP2A7P20853 494 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 UQCRC1P31930 480 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 SESN3P58005 492 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 CDK3Q00526 305 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 RAD51Q06609 339 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 ADCY2Q08462 1091 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 PAK1Q13153 545 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 KLF1Q13351 362 aaPredicted RBP6.19□□□□□ -1.42
HERC1-208ENST00000560462 ALCAMQ13740 583 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 GTF2H3Q13889 308 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 UGP2Q16851 508 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 MINDY4Q4G0A6 757 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 PYCR3Q53H96 274 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 TMTC4Q5T4D3 741 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 ARHGAP17Q68EM7 881 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 SPOPLQ6IQ16 392 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 TREML4Q6UXN2 200 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 TMTC1Q8IUR5 882 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 TTC30BQ8N4P2 665 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.19□□□□□ -1.42
HERC1-208ENST00000560462 OR7D4Q8NG98 312 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 FAM57AQ8TBR7 257 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 ENOX1Q8TC92 643 aaKnown RBP6.19□□□□□ -1.42
HERC1-208ENST00000560462 ZBED6CLQ96FA7 236 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms