RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CTSKP43235 329 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 BDKRB1P46663 353 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 DUOXA1Q1HG43 343 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 PRRT3Q5FWE3 981 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 RABEPKQ7Z6M1 372 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 TAF8Q7Z7C8 310 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 ADAMTSL2Q86TH1 951 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 ISCA2Q86U28 154 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 PDZD3Q86UT5 571 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 SPDYE1Q8NFV5 336 aaPredicted RBP10.2□□□□□ -0.78
TPM1-221ENST00000559831 STAG3L4Q8TBR4 150 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 LMX1AQ8TE12 382 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 DYDC1Q8WWB3 177 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 KIAA1191Q96A73 305 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 RMDN2Q96LZ7 410 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 LRRC61Q9BV99 259 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 OR52A5Q9H2C5 316 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 MRPL46Q9H2W6 279 aaKnown RBP10.2□□□□□ -0.78
TPM1-221ENST00000559831 DPEP2Q9H4A9 486 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 CNOT10Q9H9A5 744 aaKnown RBP10.2□□□□□ -0.78
TPM1-221ENST00000559831 FSCN3Q9NQT6 498 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 UTP6Q9NYH9 597 aaKnown RBP10.2□□□□□ -0.78
TPM1-221ENST00000559831 MID2Q9UJV3 735 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 DOLKQ9UPQ8 538 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 WDR37Q9Y2I8 494 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 ST14Q9Y5Y6 855 aa10.2□□□□□ -0.78
TPM1-221ENST00000559831 CFAP20Q9Y6A4 193 aaKnown RBP10.2□□□□□ -0.78
TPM1-221ENST00000559831 NCF1BA6NI72 391 aaPredicted RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 NCF1CA8MVU1 366 aaPredicted RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 PATE3B3GLJ2 98 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 UBXN8O00124 270 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 KERAO60938 352 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 SDC3O75056 442 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 SMIM24O75264 130 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 EPN2O95208 641 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 GUCA1CO95843 209 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 CATP04040 527 aaKnown RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 S100BP04271 92 aaPredicted RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 C8GP07360 202 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 MYL2P10916 166 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 NEFHP12036 1026 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 NCF1P14598 390 aaPredicted RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 TAC1P20366 129 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 CYP2A7P20853 494 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 MAP4P27816 1152 aaKnown RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 SERPINB4P48594 390 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 GYS2P54840 703 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 HNRNPKP61978 463 aaKnown RBP eCLIP10.19□□□□□ -0.78
TPM1-221ENST00000559831 IL9RQ01113 521 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 BNC1Q01954 994 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 GRIK2Q13002 908 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 SP140Q13342 867 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 CCDC6Q16204 474 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 TRIM61Q5EBN2 209 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 PEAR1Q5VY43 1037 aaPredicted RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 SBSNQ6UWP8 590 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 NRROSQ86YC3 692 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 GPSM1Q86YR5 675 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 RHEBL1Q8TAI7 183 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 CEP76Q8TAP6 659 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 GPBAR1Q8TDU6 330 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 DENND1AQ8TEH3 1009 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 TFGQ92734 400 aaPredicted RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 C12orf66Q96MD2 445 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 INSM2Q96T92 566 aaPredicted RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 EGFL8Q99944 293 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 ZDHHC5Q9C0B5 715 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 ARRDC1-AS1Q9H2J1 176 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 IMP3Q9NV31 184 aaKnown RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 INTS9Q9NV88 658 aaKnown RBP10.19□□□□□ -0.78
TPM1-221ENST00000559831 CD274Q9NZQ7 290 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 TAAR2Q9P1P5 351 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 SPASTQ9UBP0 616 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 TBC1D29Q9UFV1 150 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 CIDEBQ9UHD4 219 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 ASF1AQ9Y294 204 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 PCDH15Q96QU1 1955 aa10.19□□□□□ -0.78
TPM1-221ENST00000559831 TRBV23OR9-2A0A075B6M9 112 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 NEMP2A6NFY4 417 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PRR19A6NJB7 356 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 OR52A4PA6NMU1 304 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 SYCE1LA8MT33 242 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ARHGEF33A8MVX0 844 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 B4DGG1 531 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 G3V2L1 256 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 SLC16A5O15375 505 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 PSIP1O75475 530 aaKnown RBP10.18□□□□□ -0.78
TPM1-221ENST00000559831 MATN4O95460 622 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 EML2O95834 649 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 HIST1H2AGP0C0S8 130 aaPredicted RBP10.18□□□□□ -0.78
TPM1-221ENST00000559831 SBK3P0C264 359 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 GFAPP14136 432 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 CPA3P15088 417 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 HIST1H2ADP20671 130 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ACADLP28330 430 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 HOXD12P35452 270 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 MPLP40238 635 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 HALP42357 657 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 ETV4P43268 484 aa10.18□□□□□ -0.78
TPM1-221ENST00000559831 MAPK9P45984 424 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms