RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 KPNA2P52292 529 aaKnown RBP17.27■□□□□ 0.36
TPM1-218ENST00000559281 CERS6Q6ZMG9 384 aa17.27■□□□□ 0.36
TPM1-218ENST00000559281 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.36
TPM1-218ENST00000559281 C1orf54Q8WWF1 131 aa17.27■□□□□ 0.36
TPM1-218ENST00000559281 SEC14L1Q92503 715 aa17.27■□□□□ 0.36
TPM1-218ENST00000559281 RAB6BQ9NRW1 208 aa17.27■□□□□ 0.36
TPM1-218ENST00000559281 PAK5Q9P286 719 aa17.27■□□□□ 0.36
TPM1-218ENST00000559281 RIMKLBQ9ULI2 386 aa17.27■□□□□ 0.36
TPM1-218ENST00000559281 PCDHGA6Q9Y5G7 932 aa17.27■□□□□ 0.36
TPM1-218ENST00000559281 CCDC78A2IDD5 438 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 GSAPA4D1B5 854 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 SUV39H1O43463 412 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 NTRK1P04629 796 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 OR56A5P0C7T3 313 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 PRSS56P0CW18 603 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 PDHA2P29803 388 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 ARCN1P48444 511 aaKnown RBP17.26■□□□□ 0.35
TPM1-218ENST00000559281 SNX1Q13596 522 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 DNASE1L3Q13609 305 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 CCDC38Q502W7 563 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 MEI1Q5TIA1 1274 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 C4orf22Q6V702 233 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 PACS1Q6VY07 963 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 AMIGO1Q86WK6 493 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 TMEM126BQ8IUX1 230 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 PHC3Q8NDX5 983 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 MAIP1Q8WWC4 291 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 RNF31Q96EP0 1072 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 RANBP9Q96S59 729 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 GPR87Q9BY21 358 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 POMT2Q9UKY4 750 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 BTRCQ9Y297 605 aa17.26■□□□□ 0.35
TPM1-218ENST00000559281 MRPS18BQ9Y676 258 aaKnown RBP17.26■□□□□ 0.35
TPM1-218ENST00000559281 PIPSLA2A3N6 862 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 CCDC162PA2VCL2 907 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 SLC9B1P1A6NJY1 282 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 C2orf74A8MZ97 194 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 TERTO14746 1132 aaKnown RBP17.25■□□□□ 0.35
TPM1-218ENST00000559281 KDM1AO60341 852 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 CPNE3O75131 537 aaKnown RBP17.25■□□□□ 0.35
TPM1-218ENST00000559281 CREG1O75629 220 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 SCRG1O75711 98 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 TIAF1O95411 115 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 KLK3P07288 261 aaPredicted RBP17.25■□□□□ 0.35
TPM1-218ENST00000559281 APRTP07741 180 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 CCDC175P0C221 793 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 PRDX3P30048 256 aaKnown RBP17.25■□□□□ 0.35
TPM1-218ENST00000559281 FOXN2P32314 431 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 PREPP48147 710 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 RPS15P62841 145 aaKnown RBP17.25■□□□□ 0.35
TPM1-218ENST00000559281 KCNC4Q03721 635 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 PRKG2Q13237 762 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 SEMA5AQ13591 1074 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 ERV3-1Q14264 604 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 CCNG2Q16589 344 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 ZNF658BQ4V348 819 aaPredicted RBP17.25■□□□□ 0.35
TPM1-218ENST00000559281 TSTD2Q5T7W7 516 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 AFTPHQ6ULP2 937 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 HOOK3Q86VS8 718 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 OR52E1Q8NGJ3 308 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 OR6P1Q8NGX9 317 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 C9orf43Q8TAL5 461 aaPredicted RBP17.25■□□□□ 0.35
TPM1-218ENST00000559281 ELMO1Q92556 727 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 PEX13Q92968 403 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 HDAC10Q969S8 669 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 ZNF501Q96CX3 271 aaPredicted RBP17.25■□□□□ 0.35
TPM1-218ENST00000559281 LATS2Q9NRM7 1088 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 POLG2Q9UHN1 485 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 ANAPC5Q9UJX4 755 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 POLHQ9Y253 713 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 ZKSCAN5Q9Y2L8 839 aa17.25■□□□□ 0.35
TPM1-218ENST00000559281 AP3B1O00203 1094 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 NRDCO43847 1150 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 PRAMEP78395 509 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 BOP1Q14137 746 aaKnown RBP17.24■□□□□ 0.35
TPM1-218ENST00000559281 GPR19Q15760 415 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 SYTL3Q4VX76 610 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 FASTKD1Q53R41 847 aaKnown RBP17.24■□□□□ 0.35
TPM1-218ENST00000559281 ZNF662Q6ZS27 426 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 OR13J1Q8NGT2 312 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 OR4L1Q8NH43 312 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 CT55Q8WUE5 264 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 TSSK1BQ9BXA7 367 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 TWSG1Q9GZX9 223 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 LZTFL1Q9NQ48 299 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 CASS4Q9NQ75 786 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 SERTAD3Q9UJW9 196 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 ASF1AQ9Y294 204 aa17.24■□□□□ 0.35
TPM1-218ENST00000559281 DRG1Q9Y295 367 aaKnown RBP17.24■□□□□ 0.35
TPM1-218ENST00000559281 OR51F1A6NGY5 319 aa17.23■□□□□ 0.35
TPM1-218ENST00000559281 BTN3A3O00478 584 aa17.23■□□□□ 0.35
TPM1-218ENST00000559281 BTN3A1O00481 513 aa17.23■□□□□ 0.35
TPM1-218ENST00000559281 WISP1O95388 367 aa17.23■□□□□ 0.35
TPM1-218ENST00000559281 GOT2P00505 430 aaKnown RBP17.23■□□□□ 0.35
TPM1-218ENST00000559281 SHMT2P34897 504 aa17.23■□□□□ 0.35
TPM1-218ENST00000559281 NFKB2Q00653 900 aa17.23■□□□□ 0.35
TPM1-218ENST00000559281 AARS2Q5JTZ9 985 aaKnown RBP17.23■□□□□ 0.35
TPM1-218ENST00000559281 ATP1A1-AS1Q5TC04 95 aa17.23■□□□□ 0.35
TPM1-218ENST00000559281 DRICH1Q6PGQ1 229 aaPredicted RBP17.23■□□□□ 0.35
TPM1-218ENST00000559281 FBXO38Q6PIJ6 1188 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms