RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TCEA3O75764 348 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 FAM155BO75949 473 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 TSPAN12O95859 305 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 VIPP01282 170 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 SLC2A4P14672 509 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 FDXRP22570 491 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CD151P48509 253 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 EPHA4P54764 986 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 HSPA14Q0VDF9 509 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CUL1Q13616 776 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 KYNUQ16719 465 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 AMZ1Q400G9 498 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.14□□□□□ -0.63
SNX1-204ENST00000559061 TEX35Q5T0J7 233 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CYHR1Q6ZMK1 362 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 USP53Q70EK8 1073 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CYS1Q717R9 158 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 FLVCR1-AS1Q8TAF5 88 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CALML6Q8TD86 181 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 FBF1Q8TES7 1133 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 IFT81Q8WYA0 676 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 KCNJ9Q92806 393 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CXorf40BQ96DE9 158 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 ATXN7L3BQ96GX2 97 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 TTC1Q99614 292 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 SLC38A3Q99624 504 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 GPR21Q99679 349 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 FAM129AQ9BZQ8 928 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CDC42EP4Q9H3Q1 356 aaKnown RBP11.14□□□□□ -0.63
SNX1-204ENST00000559061 VPS37BQ9H9H4 285 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 KCNK4Q9NYG8 393 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 PDP2Q9P2J9 529 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 IKZF3Q9UKT9 509 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 ICKQ9UPZ9 632 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CLCA2Q9UQC9 943 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 NEUROG3Q9Y4Z2 214 aa11.14□□□□□ -0.63
SNX1-204ENST00000559061 CELSR3Q9NYQ7 3312 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 IGHV5-10-1A0A0J9YXX1 117 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 HMX2A2RU54 273 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 BTN3A3O00478 584 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 MATN4O95460 622 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 C9P02748 559 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 THRAP10827 490 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 CDK4P11802 303 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 TYRP1P17643 537 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 MPSTP25325 297 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 PEBP1P30086 187 aaKnown RBP11.13□□□□□ -0.63
SNX1-204ENST00000559061 GMPRP36959 345 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 PPARGP37231 505 aaPredicted RBP11.13□□□□□ -0.63
SNX1-204ENST00000559061 HALP42357 657 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 BDKRB1P46663 353 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 CAPZBP47756 277 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 SPIDRQ14159 915 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 C16orf72Q14CZ0 275 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 KBTBD12Q3ZCT8 623 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 PLEKHS1Q5SXH7 462 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 HECTD2Q5U5R9 776 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 ZNF449Q6P9G9 518 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 RBM44Q6ZP01 1051 aaKnown RBP11.13□□□□□ -0.63
SNX1-204ENST00000559061 C3orf62Q6ZUJ4 267 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 CPNE9Q8IYJ1 553 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 ZBTB2Q8N680 514 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 OR52E1Q8NGJ3 308 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 DENND1AQ8TEH3 1009 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 TFGQ92734 400 aaPredicted RBP11.13□□□□□ -0.63
SNX1-204ENST00000559061 DLG3Q92796 817 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 PPM1MQ96MI6 270 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 PANX3Q96QZ0 392 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 GFM1Q96RP9 751 aaKnown RBP11.13□□□□□ -0.63
SNX1-204ENST00000559061 FMO2Q99518 471 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 HGH1Q9BTY7 390 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 XKR8Q9H6D3 395 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 SYNDIG1Q9H7V2 258 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 PPANQ9NQ55 473 aaKnown RBP11.13□□□□□ -0.63
SNX1-204ENST00000559061 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 CIDEBQ9UHD4 219 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 TSR3Q9UJK0 312 aaKnown RBP11.13□□□□□ -0.63
SNX1-204ENST00000559061 PLAGL1Q9UM63 463 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 DHRS7Q9Y394 339 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 MSRB2Q9Y3D2 182 aa11.13□□□□□ -0.63
SNX1-204ENST00000559061 KNTC1P50748 2209 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 H3BMM5 538 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 KIF1CO43896 1103 aaKnown RBP11.12□□□□□ -0.63
SNX1-204ENST00000559061 UBXN7O94888 489 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 CPNE6O95741 557 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 APOA4P06727 396 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 PROS1P07225 676 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 GSTA2P09210 222 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 CD9P21926 228 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 ATP5DP30049 168 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 CCKBRP32239 447 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 MAPK9P45984 424 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 LSSP48449 732 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 CSRP3P50461 194 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 LIMK2P53671 638 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 GPLD1P80108 840 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 ABRQ12979 859 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 PRKG2Q13237 762 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 ZNF460Q14592 562 aa11.12□□□□□ -0.63
SNX1-204ENST00000559061 SYTL3Q4VX76 610 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms