RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 C17orf113A0A1B0GUU1 675 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 GOLGA8KD6RF30 607 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 GOLGA8TH3BQL2 631 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 TK2O00142 265 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 BTN3A1O00481 513 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 NRDCO43847 1150 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 AVILO75366 819 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 MAP4P27816 1152 aaKnown RBP12.17□□□□□ -0.46
SMAD3-208ENST00000558827 DLSTP36957 453 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 NSG1P42857 185 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 NFATC3Q12968 1075 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 PRKAA1Q13131 559 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 ZNF658BQ4V348 819 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-208ENST00000558827 SYTL3Q4VX76 610 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 FASTKD1Q53R41 847 aaKnown RBP12.17□□□□□ -0.46
SMAD3-208ENST00000558827 TTC27Q6P3X3 843 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 ZNF449Q6P9G9 518 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 FAM199XQ6PEV8 388 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-208ENST00000558827 AFTPHQ6ULP2 937 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 ZNF662Q6ZS27 426 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 PPP1R3BQ86XI6 285 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 FAM20CQ8IXL6 584 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 C2orf73Q8N5S3 287 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-208ENST00000558827 OTUD6BQ8N6M0 293 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 ACVR1CQ8NER5 493 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 OR52E1Q8NGJ3 308 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 UBXN4Q92575 508 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.17□□□□□ -0.464e-6■■■■■ 31.4
SMAD3-208ENST00000558827 KIAA1143Q96AT1 154 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-208ENST00000558827 STAMBPL1Q96FJ0 436 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 SLC41A2Q96JW4 573 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 TRIM56Q9BRZ2 755 aaKnown RBP12.17□□□□□ -0.46
SMAD3-208ENST00000558827 ZPBPQ9BS86 351 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 VPS37BQ9H9H4 285 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 FGF21Q9NSA1 209 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 SYBUQ9NX95 663 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 CROTQ9UKG9 612 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 RARRES3Q9UL19 164 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 SPTA1P02549 2419 aa12.17□□□□□ -0.46
SMAD3-208ENST00000558827 TLN1Q9Y490 2541 aaKnown RBP12.16□□□□□ -0.46
SMAD3-208ENST00000558827 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
SMAD3-208ENST00000558827 TLCD2A6NGC4 264 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 TOX3O15405 576 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-208ENST00000558827 AP2A2O94973 939 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 KRT14P02533 472 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 OR56A5P0C7T3 313 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 FGF5P12034 268 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 PSMA3P25788 255 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 NDUFS1P28331 727 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 OAS2P29728 719 aaKnown RBP12.16□□□□□ -0.46
SMAD3-208ENST00000558827 ABRQ12979 859 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 GPS1Q13098 491 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 ITIH4Q14624 930 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 PCID2Q5JVF3 399 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 COLEC12Q5KU26 742 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 ANKRD22Q5VYY1 191 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 ZNF605Q86T29 641 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 VRK3Q8IV63 474 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 REXO1L1PQ8IX06 675 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 SLC35F6Q8N357 371 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 LSM14AQ8ND56 463 aaKnown RBP12.16□□□□□ -0.46
SMAD3-208ENST00000558827 MAIP1Q8WWC4 291 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 MAGOHBQ96A72 148 aaKnown RBP12.16□□□□□ -0.46
SMAD3-208ENST00000558827 MED8Q96G25 268 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 RANBP9Q96S59 729 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 RAB33BQ9H082 229 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 PDE7BQ9NP56 450 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 CATSPERZQ9NTU4 200 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 IL1RAPL1Q9NZN1 696 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 ICKQ9UPZ9 632 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 ASF1AQ9Y294 204 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 HEBP2Q9Y5Z4 205 aa12.16□□□□□ -0.46
SMAD3-208ENST00000558827 ZNF891A8MT65 544 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-208ENST00000558827 BHMG1C9JSJ3 638 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-208ENST00000558827 GOLGA8MH3BSY2 632 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 ZNF185O15231 689 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 CD3EAPO15446 510 aaKnown RBP12.15□□□□□ -0.46
SMAD3-208ENST00000558827 FTH1P02794 183 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 TPBGLP0DKB5 382 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 ST6GAL1P15907 406 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 PRDX3P30048 256 aaKnown RBP12.15□□□□□ -0.46
SMAD3-208ENST00000558827 CCR7P32248 378 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 STAT5AP42229 794 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 RPS18P62269 152 aaKnown RBP12.15□□□□□ -0.46
SMAD3-208ENST00000558827 HSD11B2P80365 405 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 ABHD18Q0P651 414 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 HSPA14Q0VDF9 509 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 ERV3-1Q14264 604 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 IL11RAQ14626 422 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 DRICH1Q6PGQ1 229 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-208ENST00000558827 TMEM135Q86UB9 458 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 TAX1BP1Q86VP1 789 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 AMIGO1Q86WK6 493 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 MPP5Q8N3R9 675 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 ESX1Q8N693 406 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 COG1Q8WTW3 980 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 CT55Q8WUE5 264 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 ZFPM2Q8WW38 1151 aa12.15□□□□□ -0.46
SMAD3-208ENST00000558827 STARD8Q92502 1023 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms