RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SMSP52788 366 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 CASP6P55212 293 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 RBPJQ06330 500 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PIGHQ14442 188 aaPredicted RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 NFE2L1Q14494 772 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PAFAH1B3Q15102 231 aaKnown RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 SMTNL2Q2TAL5 461 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 ATP13A5Q4VNC0 1218 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 KHDC1Q4VXA5 237 aaKnown RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 ZNF789Q5FWF6 425 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 LDLRAP1Q5SW96 308 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PRAMEF13Q5VWM6 474 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 ZNF385CQ66K41 422 aaPredicted RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 TLDC1Q6P9B6 456 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 TMEM207Q6UWW9 146 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 ISLR2Q6UXK2 745 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 GFRALQ6UXV0 394 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 FAM83HQ6ZRV2 1179 aaPredicted RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 PPP1R32Q7Z5V6 425 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 HOOK3Q86VS8 718 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 ZNF295-AS1Q8N0V1 137 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 CCNYQ8ND76 341 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 OR1N1Q8NGS0 311 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PROKR1Q8TCW9 393 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 DTX3LQ8TDB6 740 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 CHTF18Q8WVB6 975 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 LCN9Q8WX39 176 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 TRIM11Q96F44 468 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PPM1MQ96MI6 270 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 SLX1AQ9BQ83 275 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 CCM2Q9BSQ5 444 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 REPIN1Q9BWE0 567 aaKnown RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 LHPPQ9H008 270 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 WWP1Q9H0M0 922 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 SRMSQ9H3Y6 488 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 KIR3DX1Q9H7L2 352 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 CBX8Q9HC52 389 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PCDH18Q9HCL0 1135 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 BPIFA1Q9NP55 256 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 TXLNGQ9NUQ3 528 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 TAS2R14Q9NYV8 317 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 POMT2Q9UKY4 750 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 ZNF711Q9Y462 761 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 CFAP20Q9Y6A4 193 aaKnown RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 PCNX1Q96RV3 2341 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 SPENQ96T58 3664 aaKnown RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 CELSR2Q9HCU4 2923 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 A0A1B0GTL3 188 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CCDC78A2IDD5 438 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MGAT4DA6NG13 374 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 OR2AG2A6NM03 316 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 C2orf74A8MZ97 194 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MASP2O00187 686 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 KCNN4O15554 427 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 OR2B3O76000 313 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 NADKO95544 446 aaPredicted RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 CRYABP02511 175 aaKnown RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 SLC4A1P02730 911 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 POLBP06746 335 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MMP2P08253 660 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 SLC35G4P0C7Q5 338 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 PIRTP0C851 137 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CBSLP0DN79 551 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MYBL1P10243 752 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 ST6GAL1P15907 406 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MSH3P20585 1137 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 AGAP20933 346 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MMP11P24347 488 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 PBLDP30039 288 aaPredicted RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 CBSP35520 551 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 PBX1P40424 430 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 SSR1P43307 286 aaKnown RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 LMAN1P49257 510 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CTSCP53634 463 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 KCNK10P57789 538 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 UBXN1Q04323 297 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 ITGA9Q13797 1035 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 KRT31Q15323 416 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 PPP2R5EQ16537 467 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 HADHQ16836 314 aaKnown RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 LONRF2Q1L5Z9 754 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 NKAIN1Q4KMZ8 207 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CCDC183Q5T5S1 534 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 C1orf189Q5VU69 101 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 ZNF324BQ6AW86 544 aaPredicted RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 RHBDD2Q6NTF9 364 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MRPL14Q6P1L8 145 aaKnown RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 ZNF449Q6P9G9 518 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 IRF2BP2Q7Z5L9 587 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CDH24Q86UP0 819 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 NT5DC3Q86UY8 548 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MAP7D3Q8IWC1 876 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CFAP206Q8IYR0 622 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 RASGEF1AQ8N9B8 481 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 KCTD6Q8NC69 237 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CATSPER1Q8NEC5 780 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 ACVR1CQ8NER5 493 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 DNAJB8Q8NHS0 232 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 ENOX1Q8TC92 643 aaKnown RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 DENND1AQ8TEH3 1009 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms