RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CCDC183Q5T5S1 534 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 FRG2Q64ET8 278 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 OR6B2Q6IFH4 312 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 GAGE2AQ6NT46 116 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 IRGCQ6NXR0 463 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 ANKRD54Q6NXT1 300 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CYB5D1Q6P9G0 228 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 MACC1Q6ZN28 852 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 MEPCEQ7L2J0 689 aaKnown RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 TAF8Q7Z7C8 310 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 AQP12AQ8IXF9 295 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 KLHDC8AQ8IYD2 350 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 DSELQ8IZU8 1212 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 RYBPQ8N488 228 aaPredicted RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 AMER3Q8N944 861 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CLEC1AQ8NC01 280 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 OR2AJ1Q8NGZ0 328 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CKAP2Q8WWK9 683 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 SLC5A11Q8WWX8 675 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 DNAAF4Q8WXU2 420 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 SLC25A28Q96A46 364 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 DTNBP1Q96EV8 351 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 DTD2Q96FN9 168 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CNDP1Q96KN2 507 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 FAM81BQ96LP2 452 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 COQ10AQ96MF6 247 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 BBC3Q96PG8 261 aaPredicted RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 SSX3Q99909 188 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 ATG101Q9BSB4 218 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CARD6Q9BX69 1037 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 B3GNT4Q9C0J1 378 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 NAPBQ9H115 298 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 DPAGT1Q9H3H5 408 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 WDR26Q9H7D7 661 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 VPS37BQ9H9H4 285 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 GAGE2DQ9UEU5 116 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 UTS2RQ9UKP6 389 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 DNPEPQ9ULA0 475 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 SMC3Q9UQE7 1217 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 KCNK6Q9Y257 313 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 PLEKHA6Q9Y2H5 1048 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 SQORQ9Y6N5 450 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 KIAA1217Q5T5P2 1943 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ILVBLA1L0T0 632 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 DENND3A2RUS2 1198 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 CTAGE9A4FU28 777 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 NEMP2A6NFY4 417 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 HEPACAM2A8MVW5 462 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 F8W810 466 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 H0YGN5 161 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 TMEM189-UBE2V1I3L0A0 370 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 TO15178 435 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 FLRT2O43155 660 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SPINT2O43291 252 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SCGB2A1O75556 95 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 OR6B1O95007 311 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 EPN2O95208 641 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 PEX11BO96011 259 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 LCATP04180 440 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 KRT6BP04259 564 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SFTPCP11686 197 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ZNF18P17022 549 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 PIK3R1P27986 724 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 TNFSF8P32971 234 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SOX6P35712 828 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 AVPR1AP37288 418 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 EIF2S3P41091 472 aaKnown RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 AVPR1BP47901 424 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ARCN1P48444 511 aaKnown RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 KRT6CP48668 564 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SELENOPP49908 381 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SMSP52788 366 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 MTCP1P56278 107 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SRP54P61011 504 aaKnown RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 UBE2V1Q13404 147 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 CUL3Q13618 768 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 PDE7AQ13946 482 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 STXBP2Q15833 593 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 EIF2S3LQ2VIR3 472 aaKnown RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 LRRC23Q53EV4 343 aaPredicted RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 TAF1BQ53T94 588 aaPredicted RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 HERC4Q5GLZ8 1057 aaPredicted RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 LY6G5CQ5SRR4 150 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 CCNYL2Q5T2Q4 361 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 WDR88Q6ZMY6 472 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 TMPRSS11FQ6ZWK6 438 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ZNF534Q76KX8 674 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 GRASPQ7Z6J2 395 aaPredicted RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 PATL1Q86TB9 770 aaKnown RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 PALB2Q86YC2 1186 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 GCSAMQ8N6F7 178 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ANKRD13CQ8N6S4 541 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SYT8Q8NBV8 401 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 SLC38A9Q8NBW4 561 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 KIAA0895Q8NCT3 520 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 TMEM185AQ8NFB2 350 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 BHLHE22Q8NFJ8 381 aaPredicted RBP3.68□□□□□ -1.82
TDP1-217ENST00000557782 PROKR1Q8TCW9 393 aa3.68□□□□□ -1.82
TDP1-217ENST00000557782 ZNF398Q8TD17 642 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms