RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SCARB2Q14108 478 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TOMM20Q15388 145 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 WSCD2Q2TBF2 565 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CAVIN4Q5BKX8 364 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 GLRX5Q86SX6 157 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 SATL1Q86VE3 508 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CCDC13Q8IYE1 715 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 LSMEM2Q8N112 164 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM199Q8N511 208 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 RFLNBQ8N5W9 214 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CPSF7Q8N684 471 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 NAT8LQ8N9F0 302 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 SPERTQ8NA61 448 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 SMYD1Q8NB12 490 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 OR2AK2Q8NG84 335 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 ERMNQ8TAM6 284 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 LPGAT1Q92604 370 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 HDAC11Q96DB2 347 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 RTP4Q96DX8 246 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 HES6Q96HZ4 224 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 C17orf77Q96MU5 243 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 MS4A10Q96PG2 267 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CAPS2Q9BXY5 557 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 PNNQ9H307 717 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 EQTNQ9NQ60 294 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 SERINC1Q9NRX5 453 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 FETUBQ9UGM5 382 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 PDS5AQ29RF7 1337 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 C1orf226A1L170 272 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 H0YIN7 160 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 DYNC1I1O14576 645 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SYNGR3O43761 229 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PRKNO60260 465 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 WISP2O76076 250 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 C22orf31O95567 290 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ABCB1P08183 1280 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HSPA5P11021 654 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CSF2RAP15509 400 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GCH1P30793 250 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TIA1P31483 386 aaKnown RBP eCLIP1.64□□□□□ -2.156e-7■■■■■ 33.5
HIF1A-212ENST00000557538 HOXA1P49639 335 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PPATQ06203 517 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 LRRC74AQ0VAA2 488 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PNRC1Q12796 327 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 IL11RAQ14626 422 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PTPN14Q15678 1187 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HYAL4Q2M3T9 481 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 EIF2S3LQ2VIR3 472 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 C6orf136Q5SQH8 315 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HIST2H2BCQ6DN03 193 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HIST2H2BDQ6DRA6 164 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GALNT17Q6IS24 598 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CLEC17AQ6ZS10 378 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 NFE4Q86UQ8 179 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GPR180Q86V85 440 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 L3MBTL4Q8NA19 623 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM255BQ8WV15 326 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 N4BP2L2Q92802 583 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 DHX58Q96C10 678 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CDCA5Q96FF9 252 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF479Q96JC4 524 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 RMDN2Q96LZ7 410 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 RBM14Q96PK6 669 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 OR1F2PQ96R84 312 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 OR6C1Q96RD1 312 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 MRPL44Q9H9J2 332 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ZBTB20Q9HC78 741 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF446Q9NWS9 450 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 MIS18AQ9NYP9 233 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 LRWD1Q9UFC0 647 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ARID2Q68CP9 1835 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TTC21BQ7Z4L5 1316 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 IGHV4OR15-8A0A075B7B6 117 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CLRN2A0PK11 232 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 C5orf60A6NFR6 353 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 J3QR06 171 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CPLX1O14810 134 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 RSL1D1O76021 490 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 BMP15O95972 392 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 OR2T7P0C7T2 308 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 MYBL1P10243 752 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PCP11498 1178 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 FGF5P12034 268 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TCEA1P23193 301 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HOXA6P31267 233 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TCF7P36402 384 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SNX16P57768 344 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PRPF4BQ13523 1007 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PSMD6Q15008 389 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HECTD3Q5T447 861 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 C9orf57Q5W0N0 161 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PLA2G4FQ68DD2 849 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 WBP2NLQ6ICG8 309 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TYW3Q6IPR3 259 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 RAPH1Q70E73 1250 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TUBA1AQ71U36 451 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PLPPR4Q7Z2D5 763 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 C16orf82Q7Z2V1 217 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms