RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FGF11Q92914 225 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 MFSD3Q96ES6 412 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CCDC74BQ96LY2 380 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 ZNF778Q96MU6 729 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 FOPNLQ96NB1 174 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 NUDT22Q9BRQ3 303 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 FAM167BQ9BTA0 163 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 TUBB2BQ9BVA1 445 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CARD6Q9BX69 1037 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 TBC1D10AQ9BXI6 508 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 RAB17Q9H0T7 212 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 MVB12BQ9H7P6 319 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 SLC40A1Q9NP59 571 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 PPANQ9NQ55 473 aaKnown RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 TREX1Q9NSU2 369 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 C20orf96Q9NUD7 363 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 INTS10Q9NVR2 710 aaKnown RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 SCHIP1Q9P0W5 487 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 ZNF624Q9P2J8 865 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 DKK4Q9UBT3 224 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 PISDQ9UG56 409 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 KLHL3Q9UH77 587 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 SATB2Q9UPW6 733 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 ASF1AQ9Y294 204 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 PCDHGA8Q9Y5G5 932 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 NCOR2Q9Y618 2525 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 LRP4O75096 1905 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 A8MU76 341 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 AGRPO00253 132 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 MATN2O00339 956 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 OR1I1O60431 355 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ESR1P03372 595 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ITGA2BP08514 1039 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 BRAFP15056 766 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ITGB6P18564 788 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 RPS3P23396 243 aaKnown RBP eCLIP8.13□□□□□ -1.11
PSEN1-223ENST00000557511 GPC1P35052 558 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ITGA8P53708 1063 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 PCBP4P57723 403 aaKnown RBP8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ERVPABLB-1P60509 514 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ZFP36L1Q07352 338 aaKnown RBP8.13□□□□□ -1.11
PSEN1-223ENST00000557511 C2orf54Q08AI8 447 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 HSPA14Q0VDF9 509 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 GPR18Q14330 331 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 CLCA4Q14CN2 919 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 BRD3Q15059 726 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 HIF1AQ16665 826 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 WHAMMP3Q1A5X7 153 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 TBC1D25Q3MII6 688 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 TTLL9Q3SXZ7 439 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 SPANXN3Q5MJ09 141 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 BROXQ5VW32 411 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 IRGCQ6NXR0 463 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 FAM83HQ6ZRV2 1179 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ZNF534Q76KX8 674 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 PROSER1Q86XN7 944 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 FAM129CQ86XR2 697 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 SLITRK4Q8IW52 837 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ZNF248Q8NDW4 579 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ACVR1CQ8NER5 493 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 NAT14Q8WUY8 206 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 LCN9Q8WX39 176 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 TFGQ92734 400 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-223ENST00000557511 LRRC39Q96DD0 335 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 TGM7Q96PF1 710 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 TRIM51Q9BSJ1 452 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 TRIT1Q9H3H1 467 aaKnown RBP8.13□□□□□ -1.11
PSEN1-223ENST00000557511 SRMSQ9H3Y6 488 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 POLG2Q9UHN1 485 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 WDR37Q9Y2I8 494 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 NEU2Q9Y3R4 380 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 CFAP20Q9Y6A4 193 aaKnown RBP8.13□□□□□ -1.11
PSEN1-223ENST00000557511 FAM169AQ9Y6X4 670 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 DNAH14Q0VDD8 3507 aa8.13□□□□□ -1.11
PSEN1-223ENST00000557511 IGHV5-10-1A0A0J9YXX1 117 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 PABPN1LA6NDY0 278 aaKnown RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 PRR19A6NJB7 356 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 GOLGA8KD6RF30 607 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 GOLGA8TH3BQL2 631 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 TOX3O15405 576 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 SEC31AO94979 1220 aaKnown RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 THRAP10827 490 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 MPSTP25325 297 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 FMO4P31512 558 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 CAPZBP47756 277 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 PREPP48147 710 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 CSE1LP55060 971 aaKnown RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 CAV1Q03135 178 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 DNTTIP2Q5QJE6 756 aaKnown RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 CACHD1Q5VU97 1274 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 ZNF470Q6ECI4 717 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 CAPRIN2Q6IMN6 1127 aaKnown RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 UGT3A1Q6NUS8 523 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 C8orf74Q6P047 294 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 IGF2-ASQ6U949 168 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 CENPUQ71F23 418 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 B3GNT8Q7Z7M8 397 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 LDB1Q86U70 411 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 TMEM135Q86UB9 458 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms