RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CSPG4P5Q96PW8 444 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 NUDT9Q9BW91 350 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 TDRD1Q9BXT4 1180 aaKnown RBP5.73□□□□□ -1.49
VPS33B-207ENST00000557470 CARD9Q9H257 536 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 FAM83DQ9H4H8 585 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 IFT22Q9H7X7 185 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PDE7BQ9NP56 450 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SLC40A1Q9NP59 571 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PARVAQ9NVD7 372 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 DTLQ9NZJ0 730 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 ATXN10Q9UBB4 475 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 EPHA6Q9UF33 1036 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SLC23A2Q9UGH3 650 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 RARRES3Q9UL19 164 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 CHKBQ9Y259 395 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SLC5A6Q9Y289 635 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 DNAJC16Q9Y2G8 782 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 ITPR3Q14573 2671 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 TACC2O95359 2948 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 TRAV20A0A0B4J274 112 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 SSU72P8A0A1W2PR75 194 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 A6NL46 340 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 CHUKO15111 745 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF185O15231 689 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 RNF8O76064 485 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 MTA2O94776 668 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 TMEM63AO94886 807 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ATE1O95260 518 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 EBLN1P0CF75 366 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 PYGMP11217 842 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 PRF1P14222 555 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF7P17097 686 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 IL4RP24394 825 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 RPL10P27635 214 aaKnown RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ARL4AP40617 200 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 DRG2P55039 364 aaKnown RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ITGA1P56199 1179 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 TBX2Q13207 712 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 GPS2Q13227 327 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 RAPSNQ13702 412 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 DPYSL2Q16555 572 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 INSCQ1MX18 579 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 TDRD12Q587J7 1177 aaKnown RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ZRANB3Q5FWF4 1079 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF569Q5MCW4 686 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 XP32Q5T750 250 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 CDKAL1Q5VV42 579 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 LCN10Q6JVE6 187 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 CYB5D1Q6P9G0 228 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF517Q6ZMY9 492 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ADGRG6Q86SQ4 1221 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF547Q8IVP9 402 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 RHOT1Q8IXI2 618 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 SIDT2Q8NBJ9 832 aaKnown RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 LPCAT1Q8NF37 534 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 NEK11Q8NG66 645 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ARRDC2Q8TBH0 407 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 HSPH1Q92598 858 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 EID2BQ96D98 161 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 SNRNP40Q96DI7 357 aaKnown RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF514Q96K75 400 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 FCRL4Q96PJ5 515 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 RANBP9Q96S59 729 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 LYSMD1Q96S90 227 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 SYT11Q9BT88 431 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 MENTQ9BUN1 341 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 POLR1EQ9GZS1 481 aaKnown RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 CHST8Q9H2A9 424 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 FGF21Q9NSA1 209 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 POT1Q9NUX5 634 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 ASF1BQ9NVP2 202 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 PKD2L2Q9NZM6 624 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 SEMA5BQ9P283 1151 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 DNPEPQ9ULA0 475 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 FARSAQ9Y285 508 aaKnown RBP5.72□□□□□ -1.49
VPS33B-207ENST00000557470 TTLL3Q9Y4R7 772 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 POLEQ07864 2286 aa5.72□□□□□ -1.49
VPS33B-207ENST00000557470 HIVEP1P15822 2718 aa5.71□□□□□ -1.49
VPS33B-207ENST00000557470 CSMD2Q7Z408 3487 aa5.71□□□□□ -1.49
VPS33B-207ENST00000557470 PCSK5Q92824 1860 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 RGSL1A5PLK6 1076 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ANKUB1A6NFN9 424 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 GPR89AB7ZAQ6 455 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 KMOO15229 486 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 MFSD11O43934 449 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 MTX2O75431 263 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 SCRG1O75711 98 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 SLC25A14O95258 325 aaPredicted RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 GPR89BP0CG08 455 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ATP1A3P13637 1013 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 HNRNPH3P31942 346 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 SERPINB6P35237 376 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 PCK1P35558 622 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 RPL26P61254 145 aaKnown RBP5.71□□□□□ -1.5
VPS33B-207ENST00000557470 UBE2HP62256 183 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 TUBB4BP68371 445 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 PDE1BQ01064 536 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 ACY1Q03154 408 aa5.71□□□□□ -1.5
VPS33B-207ENST00000557470 CDK18Q07002 472 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms