RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GATCO43716 136 aaKnown RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PEX11AO75192 247 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 VAPBO95292 243 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SERPINE1P05121 402 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 YWHAQP27348 245 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 NUMBP49757 651 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 NDST2P52849 883 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 STX1BP61266 288 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 DSC2Q02487 901 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 UBE3AQ05086 875 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 DLG1Q12959 904 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ITGA9Q13797 1035 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PRPSAP1Q14558 356 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TRIP4Q15650 581 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 KCNJ8Q15842 424 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SSX2Q16385 188 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TBRG1Q3YBR2 411 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ANKS6Q68DC2 871 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RFWD3Q6PCD5 774 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 POTEHQ6S545 545 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 PRSS55Q6UWB4 352 aaPredicted RBP5.02□□□□□ -1.61
TMEM260-210ENST00000556422 NUDT13Q86X67 352 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TEX26Q8N6G2 289 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 OR13J1Q8NGT2 312 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ARRDC2Q8TBH0 407 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 FBXO32Q969P5 355 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SCLYQ96I15 445 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 FAR2Q96K12 515 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 BTN2A3PQ96KV6 586 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 GPR78Q96P69 363 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 TBCDQ9BTW9 1192 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 RHOJQ9H4E5 214 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 WBP1LQ9NX94 342 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 SNX7Q9UNH6 387 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 NAALAD2Q9Y3Q0 740 aa5.02□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 DRGXA6NNA5 263 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 GPR89AB7ZAQ6 455 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 H0Y858 1186 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 NDUFS8O00217 210 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PHGDHO43175 533 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 IL6P05231 212 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ANXA6P08133 673 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 GPR89BP0CG08 455 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ZCCHC18P0CG32 403 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 FOSL2P15408 326 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CALB2P22676 271 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 GSTM2P28161 218 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SLC6A4P31645 630 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 BMI1P35226 326 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PPM1AP35813 382 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 GEMP55040 296 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ARPP19P56211 112 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 WNT3AP56704 352 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ABRQ12979 859 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF177Q13360 481 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 KPNB1Q14974 876 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TEAD4Q15561 434 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PHKG1Q16816 387 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 MGAT5BQ3V5L5 792 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 LIN52Q52LA3 116 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF789Q5FWF6 425 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SLC6A19Q695T7 634 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SETD3Q86TU7 594 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 CRLF3Q8IUI8 442 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 NKAIN4Q8IVV8 208 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 LINC00518Q8N0U6 118 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 OR8H3Q8N146 312 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SPPL2BQ8TCT7 592 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF296Q8WUU4 475 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 MSANTD3Q96H12 275 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SEPT5Q99719 369 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 BTBD10Q9BSF8 475 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 COPS4Q9BT78 406 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ASPSCR1Q9BZE9 553 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SLC25A51Q9H1U9 297 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SIAEQ9HAT2 523 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PDFQ9HBH1 243 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ENTPD7Q9NQZ7 604 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PNPOQ9NVS9 261 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ZSCAN32Q9NX65 697 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 VSX1Q9NZR4 365 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 MARCH2Q9P0N8 246 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SPASTQ9UBP0 616 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 NKX1-2Q9UD57 310 aaPredicted RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 TRMT6Q9UJA5 497 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SLC22A14Q9Y267 594 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 LRCH1Q9Y2L9 728 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 IFT52Q9Y366 437 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 ZNF175Q9Y473 711 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PCDHB7Q9Y5E2 793 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 SCN8AQ9UQD0 1980 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 FUOMA2VDF0 154 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 A6NL46 340 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PRR5-ARHGAP8B1AHC4 643 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 H7C1Q1 480 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 GSC2O15499 205 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PSMD3O43242 534 aa5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PSIP1O75475 530 aaKnown RBP5.01□□□□□ -1.61
TMEM260-210ENST00000556422 PLGP00747 810 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms