RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 CBSLP0DN79 551 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 ENO3P13929 434 aaPredicted RBP13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 ZNF37AP17032 561 aaPredicted RBP13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 TYK2P29597 1187 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 CBSP35520 551 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 SERPINB8P50452 374 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 PRKG2Q13237 762 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 PROX2Q3B8N5 592 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 GUSBP11Q6P575 273 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 TMEM207Q6UWW9 146 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 SPATA6LQ8N4H0 392 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 FAM181AQ8N9Y4 354 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 OR5AR1Q8NGP9 310 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 JPH3Q8WXH2 748 aaPredicted RBP13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 HGH1Q9BTY7 390 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 VPS11Q9H270 941 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 SLC32A1Q9H598 525 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 SYTL2Q9HCH5 934 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 EVA1BQ9NVM1 165 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 NCKIPSDQ9NZQ3 722 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 LRIT1Q9P2V4 623 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 CIDEBQ9UHD4 219 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 TLK1Q9UKI8 766 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 TDRKHQ9Y2W6 561 aaKnown RBP13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 RNF215Q9Y6U7 377 aa13.71□□□□□ -0.22
VIPAS39-208ENST00000556412 ALDOAP04075 364 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 XRCC1P18887 633 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 CD9P21926 228 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 KCNA4P22459 653 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 ACADLP28330 430 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 CRABP2P29373 138 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 ATP5DP30049 168 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 GMPRP36959 345 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 DUSP3P51452 185 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 GBX1Q14549 363 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 TAF1BQ53T94 588 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 FBXO38Q6PIJ6 1188 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 EFL1Q7Z2Z2 1120 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 Q8N9G6 341 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 ANKRD49Q8WVL7 239 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 TRIT1Q9H3H1 467 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 PPCSQ9HAB8 311 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 POPDC3Q9HBV1 291 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 POT1Q9NUX5 634 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 HEBP2Q9Y5Z4 205 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 COLEC10Q9Y6Z7 277 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 ADAMTS9Q9P2N4 1935 aa13.7□□□□□ -0.22
VIPAS39-208ENST00000556412 WDR87Q6ZQQ6 2873 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 LY6G6EA0A0G2JKS1 128 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 PPM1DO15297 605 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CBFA2T3O75081 653 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CDH16O75309 829 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CCDC166P0CW27 439 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CKMT1AP12532 417 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 GLB1P16278 677 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CKMT2P17540 419 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 KRT15P19012 456 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 ALDH4A1P30038 563 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 MAPK9P45984 424 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 BDKRB1P46663 353 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 UBE2IP63279 158 aaKnown RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 PLCL1Q15111 1095 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 ZKSCAN8Q15776 578 aaPredicted RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 PPM1JQ5JR12 505 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 PIP4P1Q86T03 277 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 TBC1D1Q86TI0 1168 aaPredicted RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 NKAPQ8N5F7 415 aaKnown RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 AVL9Q8NBF6 648 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CCDC74AQ96AQ1 378 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 SLC38A3Q99624 504 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CDC6Q99741 560 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 ZMYND15Q9H091 742 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 SYNDIG1Q9H7V2 258 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 U3KQA8 63 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 A0A096LPK6 155 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 NUDT21O43809 227 aaKnown RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 RPN2P04844 631 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 SLC35E2BP0CK96 405 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 MPC1LP0DKB6 136 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 H2AFXP16104 143 aaPredicted RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 FASLGP48023 281 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 GPR18Q14330 331 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CSHL1Q14406 222 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 TRIP6Q15654 476 aaKnown RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 RSPO4Q2I0M5 234 aaPredicted RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 KRT71Q3SY84 523 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 LRRC8EQ6NSJ5 796 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 C17orf82Q86X59 251 aaPredicted RBP13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 IFI44Q8TCB0 444 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 NAT6Q93015 286 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 MTBPQ96DY7 904 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 ZIM3Q96PE6 472 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 CENPHQ9H3R5 247 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 SLC40A1Q9NP59 571 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 PLAGL1Q9UM63 463 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 ACOT9Q9Y305 439 aa13.69□□□□□ -0.22
VIPAS39-208ENST00000556412 EP300Q09472 2414 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 FOXO6A8MYZ6 492 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 EIF3FO00303 357 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms