RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 COLEC10Q9Y6Z7 277 aa12.87□□□□□ -0.35
TUBB3-208ENST00000555576 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 PCM1Q15154 2024 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 C17orf113A0A1B0GUU1 675 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 C5orf60A6NFR6 353 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 WIPF3A6NGB9 483 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 KLF7O75840 302 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-208ENST00000555576 POLBP06746 335 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 CDH3P22223 829 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 RBL1P28749 1068 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-208ENST00000555576 PREPP48147 710 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 LMAN1P49257 510 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 PRKAA1Q13131 559 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 DENND5AQ6IQ26 1287 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 CDHR3Q6ZTQ4 885 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 BBS12Q6ZW61 710 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 HPS6Q86YV9 775 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 VSTM4Q8IW00 320 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 KLHDC8BQ8IXV7 354 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 CFAP206Q8IYR0 622 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 ADGRF3Q8IZF5 1079 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 NXPE1Q8N323 547 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 OR52E1Q8NGJ3 308 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 LCN9Q8WX39 176 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 KRT35Q92764 455 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 CLIP3Q96DZ5 547 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 TRAPPC9Q96Q05 1148 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 CCM2Q9BSQ5 444 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 TFB2MQ9H5Q4 396 aaKnown RBP12.86□□□□□ -0.35
TUBB3-208ENST00000555576 COG4Q9H9E3 785 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 GPR83Q9NYM4 423 aa12.86□□□□□ -0.35
TUBB3-208ENST00000555576 TRBV5-4A0A0C4DH59 114 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 GSAPA4D1B5 854 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 C2orf81A6NN90 581 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 APOC4-APOC2K7ER74 178 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 ZNF185O15231 689 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 HCRTR1O43613 425 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 ANXA9O76027 345 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 APOC2P02655 101 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 TPM3P06753 285 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 ATP1B2P14415 290 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-208ENST00000555576 PVRP15151 417 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 CYP2A7P20853 494 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 PSMB4P28070 264 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 PDHA2P29803 388 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 GABRA4P48169 554 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 GEMP55040 296 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 GSE1Q14687 1217 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 SNX20Q7Z614 316 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 MRGPREQ86SM8 312 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 FLVCR1-AS1Q8TAF5 88 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 C19orf60Q96EN9 201 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 TCTN2Q96GX1 697 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 DPH2Q9BQC3 489 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-208ENST00000555576 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 SRMSQ9H3Y6 488 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
TUBB3-208ENST00000555576 PIKFYVEQ9Y2I7 2098 aa12.85□□□□□ -0.35
TUBB3-208ENST00000555576 A1L4Q6 167 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 A6NL46 340 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 E7EQ34 232 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 CCL22O00626 93 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 ZNF749O43361 778 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 LDB2O43679 373 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 SNRNP200O75643 2136 aaKnown RBP12.84□□□□□ -0.35
TUBB3-208ENST00000555576 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
TUBB3-208ENST00000555576 CLDN1O95832 211 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 CD151P48509 253 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 CDKN1CP49918 316 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-208ENST00000555576 BOP1Q14137 746 aaKnown RBP12.84□□□□□ -0.35
TUBB3-208ENST00000555576 ZIC1Q15915 447 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 EIF2S3LQ2VIR3 472 aaKnown RBP12.84□□□□□ -0.35
TUBB3-208ENST00000555576 CRB2Q5IJ48 1285 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 VWA5B1Q5TIE3 1220 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 C11orf63Q6NUN7 778 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 RCOR2Q8IZ40 523 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 ULK4Q96C45 1275 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 SNRNP40Q96DI7 357 aaKnown RBP12.84□□□□□ -0.35
TUBB3-208ENST00000555576 COPS8Q99627 209 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 DHRS4Q9BTZ2 278 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 KLHL25Q9H0H3 589 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 FAM96AQ9H5X1 160 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 ARNT2Q9HBZ2 717 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 FAM60AQ9NP50 221 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 ACTR10Q9NZ32 417 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 CRLS1Q9UJA2 301 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 TFR2Q9UP52 801 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 ICKQ9UPZ9 632 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 POLEQ07864 2286 aa12.84□□□□□ -0.35
TUBB3-208ENST00000555576 CREBBPQ92793 2442 aa12.83□□□□□ -0.35
TUBB3-208ENST00000555576 CCDC88CQ9P219 2028 aa12.83□□□□□ -0.36
TUBB3-208ENST00000555576 NUP210LQ5VU65 1888 aa12.83□□□□□ -0.36
TUBB3-208ENST00000555576 C2orf74A8MZ97 194 aa12.83□□□□□ -0.36
TUBB3-208ENST00000555576 H7C0S8 307 aa12.83□□□□□ -0.36
TUBB3-208ENST00000555576 KRT86O43790 486 aa12.83□□□□□ -0.36
TUBB3-208ENST00000555576 CNOT3O75175 753 aaKnown RBP12.83□□□□□ -0.36
TUBB3-208ENST00000555576 DDAH2O95865 285 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms