RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 FBXO38Q6PIJ6 1188 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PACS1Q6VY07 963 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PRICKLE2Q7Z3G6 844 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PRUNE1Q86TP1 453 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 CCDC89Q8N998 374 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PHC3Q8NDX5 983 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 TFGQ92734 400 aaPredicted RBP13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PPM1MQ96MI6 270 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 RANBP9Q96S59 729 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 SLC25A18Q9H1K4 315 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 MVB12BQ9H7P6 319 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 RAB6BQ9NRW1 208 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 SOHLH2Q9NX45 425 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PAK5Q9P286 719 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 SLC2A6Q9UGQ3 507 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 TUBD1Q9UJT1 453 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 POMT2Q9UKY4 750 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PADI1Q9ULC6 663 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 RIMKLBQ9ULI2 386 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PCDHB3Q9Y5E6 796 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 PRSS21Q9Y6M0 314 aa13.43□□□□□ -0.26
PCNX4-209ENST00000555569 GSAPA4D1B5 854 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 LIN7AO14910 233 aaPredicted RBP13.42□□□□□ -0.26
PCNX4-209ENST00000555569 KATNA1O75449 491 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 GOT2P00505 430 aaKnown RBP13.42□□□□□ -0.26
PCNX4-209ENST00000555569 FTH1P02794 183 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 CDH3P22223 829 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 ADRA1DP25100 572 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 TUBB4BP68371 445 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 NFKB2Q00653 900 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 DNASE1L3Q13609 305 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 TUBB2AQ13885 445 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 BOP1Q14137 746 aaKnown RBP13.42□□□□□ -0.26
PCNX4-209ENST00000555569 SIX1Q15475 284 aaPredicted RBP13.42□□□□□ -0.26
PCNX4-209ENST00000555569 TMTC4Q5T4D3 741 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 ATP1A1-AS1Q5TC04 95 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 LYPLAL1Q5VWZ2 237 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 AFTPHQ6ULP2 937 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 ZNF662Q6ZS27 426 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 GLIS1Q8NBF1 620 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 OR52E1Q8NGJ3 308 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 OR8K5Q8NH50 307 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 ELMO1Q92556 727 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 HDAC10Q969S8 669 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 HGH1Q9BTY7 390 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 TUBB2BQ9BVA1 445 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 TFB2MQ9H5Q4 396 aaKnown RBP13.42□□□□□ -0.26
PCNX4-209ENST00000555569 LZTFL1Q9NQ48 299 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 LHX9Q9NQ69 397 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 CASS4Q9NQ75 786 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 C1GALT1Q9NS00 363 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 KCND3Q9UK17 655 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 BTRCQ9Y297 605 aa13.42□□□□□ -0.26
PCNX4-209ENST00000555569 SLC9B1P1A6NJY1 282 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 BTN3A3O00478 584 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 BTN3A1O00481 513 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 SNRNP200O75643 2136 aaKnown RBP13.41□□□□□ -0.26
PCNX4-209ENST00000555569 ZIC2O95409 532 aaPredicted RBP13.41□□□□□ -0.26
PCNX4-209ENST00000555569 NTRK1P04629 796 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 APRTP07741 180 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 CCDC175P0C221 793 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 OR56A5P0C7T3 313 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 ZSCAN5DPP0CG00 497 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 RPL22P35268 128 aaKnown RBP13.41□□□□□ -0.26
PCNX4-209ENST00000555569 PRKG2Q13237 762 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 GPR19Q15760 415 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 CCNG2Q16589 344 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
PCNX4-209ENST00000555569 CT55Q8WUE5 264 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 APOBEC4Q8WW27 367 aaKnown RBP13.41□□□□□ -0.26
PCNX4-209ENST00000555569 MAIP1Q8WWC4 291 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 ZNF501Q96CX3 271 aaPredicted RBP13.41□□□□□ -0.26
PCNX4-209ENST00000555569 ZNF778Q96MU6 729 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 TTC1Q99614 292 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 FANCEQ9HB96 536 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 KCND1Q9NSA2 647 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 TCAF1Q9Y4C2 921 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 PCDHGA6Q9Y5G7 932 aa13.41□□□□□ -0.26
PCNX4-209ENST00000555569 C21orf140B9A014 251 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 F8W8V4 182 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 OR1I1O60431 355 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 CPNE3O75131 537 aaKnown RBP13.4□□□□□ -0.26
PCNX4-209ENST00000555569 CREG1O75629 220 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 SCRG1O75711 98 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 ACADLP28330 430 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 PRDX3P30048 256 aaKnown RBP13.4□□□□□ -0.26
PCNX4-209ENST00000555569 PRAMEP78395 509 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 ACVR1Q04771 509 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 ERV3-1Q14264 604 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 BRD3Q15059 726 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 SYTL3Q4VX76 610 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 C4orf22Q6V702 233 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 ATG14Q6ZNE5 492 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 NLRP9Q7RTR0 991 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 AMIGO1Q86WK6 493 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 TMEM126BQ8IUX1 230 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
PCNX4-209ENST00000555569 PPHLN1Q8NEY8 458 aaKnown RBP13.4□□□□□ -0.26
PCNX4-209ENST00000555569 OR6P1Q8NGX9 317 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms