RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GRK7Q8WTQ7 553 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 SNRNP27Q8WVK2 155 aaKnown RBP19.95■□□□□ 0.78
VTI1B-205ENST00000555543 NKD1Q969G9 470 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 SLC41A2Q96JW4 573 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 CAPZA3Q96KX2 299 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 TEFMQ96QE5 360 aaKnown RBP19.95■□□□□ 0.78
VTI1B-205ENST00000555543 P2RY12Q9H244 342 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 ANAPC5Q9UJX4 755 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 KALRNO60229 2985 aa19.95■□□□□ 0.78
VTI1B-205ENST00000555543 POLR1CO15160 346 aaPredicted RBP19.94■□□□□ 0.78
VTI1B-205ENST00000555543 MLNP12872 115 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 NELFEP18615 380 aaKnown RBP19.94■□□□□ 0.78
VTI1B-205ENST00000555543 POLR2CP19387 275 aaPredicted RBP19.94■□□□□ 0.78
VTI1B-205ENST00000555543 MAGEA3P43357 314 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 TTPAP49638 278 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 KPNA2P52292 529 aaKnown RBP19.94■□□□□ 0.78
VTI1B-205ENST00000555543 PRKG2Q13237 762 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 KCNAB1Q14722 419 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 SOWAHCQ53LP3 525 aaPredicted RBP19.94■□□□□ 0.78
VTI1B-205ENST00000555543 DNTTIP2Q5QJE6 756 aaKnown RBP19.94■□□□□ 0.78
VTI1B-205ENST00000555543 KIAA0930Q6ICG6 404 aaPredicted RBP19.94■□□□□ 0.78
VTI1B-205ENST00000555543 ZNF449Q6P9G9 518 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 VRK3Q8IV63 474 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 KRT222Q8N1A0 295 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 NAT8LQ8N9F0 302 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 OR52E1Q8NGJ3 308 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 OR5AR1Q8NGP9 310 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 LCN9Q8WX39 176 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 MVB12BQ9H7P6 319 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 XAB2Q9HCS7 855 aaKnown RBP19.94■□□□□ 0.78
VTI1B-205ENST00000555543 IL1RAPL1Q9NZN1 696 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 PILRAQ9UKJ1 303 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 CDYLQ9Y232 598 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 PCDHB11Q9Y5F2 797 aa19.94■□□□□ 0.78
VTI1B-205ENST00000555543 TEX51A0A1B0GUA7 166 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 TLCD2A6NGC4 264 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 BTN3A3O00478 584 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 PRMT5O14744 637 aaPredicted RBP19.93■□□□□ 0.78
VTI1B-205ENST00000555543 PPARGP37231 505 aaPredicted RBP19.93■□□□□ 0.78
VTI1B-205ENST00000555543 MANEAQ5SRI9 462 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 CASC4Q6P4E1 433 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 FBXO38Q6PIJ6 1188 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 TIPARPQ7Z3E1 657 aaKnown RBP19.93■□□□□ 0.78
VTI1B-205ENST00000555543 CREG2Q8IUH2 290 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 OTUD6BQ8N6M0 293 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 UBXN4Q92575 508 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 OR6C1Q96RD1 312 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 CD180Q99467 661 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 NAPGQ99747 312 aaPredicted RBP19.93■□□□□ 0.78
VTI1B-205ENST00000555543 ZPBPQ9BS86 351 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 SRMSQ9H3Y6 488 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 XKR8Q9H6D3 395 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 POMT2Q9UKY4 750 aa19.93■□□□□ 0.78
VTI1B-205ENST00000555543 BTN3A1O00481 513 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 RAD1O60671 282 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 STK17BO94768 372 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 TPBGLP0DKB5 382 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 FOLR1P15328 257 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 ZNF28P17035 718 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 PTGIRP43119 386 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 PPP1R7Q15435 360 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 RNASEH2BQ5TBB1 312 aaKnown RBP19.92■□□□□ 0.78
VTI1B-205ENST00000555543 SLC22A15Q8IZD6 547 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 ZNF669Q96BR6 464 aaPredicted RBP19.92■□□□□ 0.78
VTI1B-205ENST00000555543 ELMO2Q96JJ3 720 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 UBL7Q96S82 380 aaPredicted RBP19.92■□□□□ 0.78
VTI1B-205ENST00000555543 CARD6Q9BX69 1037 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 TFB2MQ9H5Q4 396 aaKnown RBP19.92■□□□□ 0.78
VTI1B-205ENST00000555543 SAMD15Q9P1V8 674 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 PCYOX1Q9UHG3 505 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 ICKQ9UPZ9 632 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 ASF1AQ9Y294 204 aa19.92■□□□□ 0.78
VTI1B-205ENST00000555543 TMEM184BQ9Y519 407 aaPredicted RBP19.92■□□□□ 0.78
VTI1B-205ENST00000555543 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.92■□□□□ 0.78
VTI1B-205ENST00000555543 FAM237BA0A1B0GVD1 139 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 UBA6A0AVT1 1052 aaPredicted RBP19.91■□□□□ 0.78
VTI1B-205ENST00000555543 SDR42E2A6NKP2 422 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 GPC4O75487 556 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 NDUFS3O75489 264 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 DLGAP3O95886 979 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 EBLN1P0CF75 366 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 AOAHP28039 575 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 HSPA14Q0VDF9 509 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 PTK6Q13882 451 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 TYSND1Q2T9J0 566 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 ANKRD20A4Q4UJ75 823 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 CTSL3PQ5NE16 218 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 KIAA1614Q5VZ46 1190 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 ARMC3Q5W041 872 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 ARMC6Q6NXE6 501 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 PCSK4Q6UW60 755 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 PPIL6Q8IXY8 311 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 CACNA2D3Q8IZS8 1091 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 SIDT2Q8NBJ9 832 aaKnown RBP19.91■□□□□ 0.78
VTI1B-205ENST00000555543 LPGAT1Q92604 370 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 SLCO2A1Q92959 643 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 ASIC3Q9UHC3 531 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 PCDHGA4Q9Y5G9 962 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 SAR1BQ9Y6B6 198 aa19.91■□□□□ 0.78
VTI1B-205ENST00000555543 ZCWPW2A0A1B0GU75 182 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms