RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TGFB3P10600 412 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SRCP12931 536 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 CCL5P13501 91 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SELLP14151 372 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 AKR1B1P15121 316 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ITGB8P26012 769 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SSTR2P30874 369 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 NNMTP40261 264 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 NRIP1P48552 1158 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 GPR143P51810 404 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 RRP1P56182 461 aaKnown RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SEC61BP60468 96 aaKnown RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PSMC6P62333 389 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 IFI35P80217 286 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ECT2LQ008S8 904 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 BNC1Q01954 994 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PRKCZQ05513 592 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 GRSF1Q12849 480 aaKnown RBP eCLIP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 CDC16Q13042 620 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 TRAF3Q13114 568 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 MAD2L1Q13257 205 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 DHX34Q14147 1143 aaKnown RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PCLAFQ15004 111 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 TNIP1Q15025 636 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 NTRK2Q16620 822 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ATP13A5Q4VNC0 1218 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 XKR9Q5GH70 373 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 RARS2Q5T160 578 aaKnown RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 FRG2Q64ET8 278 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM198Q66K66 360 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 KRBA2Q6ZNG9 492 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 Q6ZTC4 211 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 MCM10Q7L590 875 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 EPHX4Q8IUS5 362 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ARID3BQ8IVW6 561 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 BEST3Q8N1M1 668 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PGBD5Q8N414 524 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 IQCF1Q8N6M8 205 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ZBTB8BQ8NAP8 495 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 HM13Q8TCT9 377 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 MAGEC3Q8TD91 643 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SNRNP27Q8WVK2 155 aaKnown RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SLC22A18Q96BI1 424 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 OPTNQ96CV9 577 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 MTBPQ96DY7 904 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 GRAMD2BQ96HH9 432 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 FAM84BQ96KN1 310 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 CSF3RQ99062 836 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 CDX2Q99626 313 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SEZ6LQ9BYH1 1024 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SIL1Q9H173 461 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 MAGIXQ9H6Y5 334 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 EPB41L5Q9HCM4 733 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PDE7BQ9NP56 450 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 MYOZ2Q9NPC6 264 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 NOX4Q9NPH5 578 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 GIMAP4Q9NUV9 329 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PAG1Q9NWQ8 432 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ARHGEF38Q9NXL2 777 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 CLIC5Q9NZA1 410 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 MRPL15Q9P015 296 aaKnown RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 STK39Q9UEW8 545 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 CHORDC1Q9UHD1 332 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 POLG2Q9UHN1 485 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PTRH2Q9Y3E5 179 aaKnown RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 FRMPD3Q5JV73 1810 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SSC5DA1L4H1 1573 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 FRYQ5TBA9 3013 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CCL15-CCL14A0A0B4J2E2 113 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 A8MV72 311 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MAP2K7O14733 419 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 HS3ST1O14792 307 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SMAD9O15198 467 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PAPSS1O43252 624 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ERAL1O75616 437 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CSPG5O95196 566 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KCNK5O95279 499 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CLDN14O95500 239 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 IGHV4-30-4P0DP06 118 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF12P17014 697 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 EIF2S2P20042 333 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MSH2P43246 934 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PSMC4P43686 418 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 FASLGP48023 281 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MMP14P50281 582 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PEX5P50542 639 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SUOXP51687 545 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CLCNKAP51800 687 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KCNC3Q14003 757 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KEAP1Q14145 624 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 BECN1Q14457 450 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 OASLQ15646 514 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ASIC2Q16515 512 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CALCRLQ16602 461 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CCL15Q16663 113 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 DECR1Q16698 335 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CRY2Q49AN0 593 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KCNT1Q5JUK3 1230 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 NSUN5P2Q63ZY6 315 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF280DQ6N043 979 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms