RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PTTG2Q9NZH5 202 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 VDAC3Q9Y277 283 aa2.98□□□□□ -1.93
SCFD1-213ENST00000554776 ASTN2O75129 1339 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 A0A087WYN8 130 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 TRAV34A0A0B4J273 112 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 LILRA5A6NI73 299 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 BUB3O43684 328 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 WDR1O75083 606 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 RECQL5O94762 991 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 F7P08709 466 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 LINGO3P0C6S8 592 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 ACP2P11117 423 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 POLR2CP19387 275 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 MUTP22033 750 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 MPZP25189 248 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 HSPA4P34932 840 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 PCGF2P35227 344 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 GP5P40197 560 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 USP8P40818 1118 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 CRKLP46109 303 aaKnown RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 FUT6P51993 359 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 CTSCP53634 463 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 HYAL1Q12794 435 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 HSPB3Q12988 150 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF273Q14593 569 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 RAB6CQ53S08 254 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 GCNT6Q5T4J0 391 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 STXBP5Q5T5C0 1151 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 OR7E24Q6IFN5 339 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 FAM171BQ6P995 826 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF771Q7L3S4 317 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 GLRX5Q86SX6 157 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 METTL23Q86XA0 190 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 SFR1Q86XK3 245 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 CEP57L1Q8IYX8 460 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 EXD1Q8NHP7 514 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 SETD6Q8TBK2 473 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 PPP4R1Q8TF05 950 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 SECTM1Q8WVN6 248 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 SMPDL3BQ92485 455 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 DAZLQ92904 295 aaKnown RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 PHF21AQ96BD5 680 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 STAMBPL1Q96FJ0 436 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 TTC14Q96N46 770 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 THUMPD3Q9BV44 507 aaKnown RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 RAB6CQ9H0N0 254 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 HHATLQ9HCP6 504 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 MYNNQ9NPC7 610 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 PFDN4Q9NQP4 134 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 TCP11L1Q9NUJ3 509 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 DNAJB9Q9UBS3 223 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 RALYQ9UKM9 306 aaKnown RBP2.97□□□□□ -1.93
SCFD1-213ENST00000554776 GTF3C4Q9UKN8 822 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 PADI2Q9Y2J8 665 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 LIPGQ9Y5X9 500 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 POMT1Q9Y6A1 747 aa2.97□□□□□ -1.93
SCFD1-213ENST00000554776 FLT1P17948 1338 aa2.96□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF541Q9H0D2 1346 aa2.96□□□□□ -1.93
SCFD1-213ENST00000554776 C5orf60A6NFR6 353 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 EIF3DO15371 548 aaKnown RBP eCLIP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 SLC7A4O43246 635 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 ZNHIT1O43257 154 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 SYNCRIPO60506 623 aaKnown RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 TSPAN1O60635 241 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 MED24O75448 989 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 ACSL3O95573 720 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 LIPFP07098 398 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 CDH1P12830 882 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 PDGFRAP16234 1089 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 CBLP22681 906 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 PTPN3P26045 913 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 ZNF75DP51815 510 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 RBP5P82980 135 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 PLIN5Q00G26 463 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 PNRC1Q12796 327 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 PPIGQ13427 754 aaKnown RBP eCLIP2.96□□□□□ -1.942e-7■□□□□ 11.3
SCFD1-213ENST00000554776 GTF2H2Q13888 395 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 ZNF234Q14588 700 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 MPP7Q5T2T1 576 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 TRNP1Q6NT89 227 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 GTF2H2CQ6P1K8 395 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 ASB18Q6ZVZ8 466 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 TMPRSS11FQ6ZWK6 438 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 ERN2Q76MJ5 926 aaKnown RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 DGLUCYQ7Z3D6 616 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 ADCK2Q7Z695 626 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 TMPRSS11BQ86T26 416 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 EXOC3L1Q86VI1 746 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 FAM219AQ8IW50 185 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 MFN1Q8IWA4 741 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 MUC20Q8N307 709 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 IQUBQ8NA54 791 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 KBTBD3Q8NAB2 608 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 THAP6Q8TBB0 222 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 DEPDC1BQ8WUY9 529 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 KCNE4Q8WWG9 221 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 EXOC4Q96A65 974 aa2.96□□□□□ -1.94
SCFD1-213ENST00000554776 OTUB1Q96FW1 271 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 RAB3IPQ96QF0 476 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-213ENST00000554776 CITED2Q99967 270 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms