RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CLEC18BQ6UXF7 455 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 FAM151BQ6UXP7 276 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 GSPT2Q8IYD1 628 aaKnown RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 ZNF567Q8N184 647 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 SLC25A41Q8N5S1 370 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 CLEC18CQ8NCF0 446 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 CT55Q8WUE5 264 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 NAT14Q8WUY8 206 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 TFB1MQ8WVM0 346 aaKnown RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 CXorf40BQ96DE9 158 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 SLC41A2Q96JW4 573 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 FAM118BQ9BPY3 351 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 GORASP1Q9BQQ3 440 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 TRIM31Q9BZY9 425 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 RAB33BQ9H082 229 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 AKIRIN1Q9H9L7 192 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 FAM153AQ9UHL3 310 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 ANAPC5Q9UJX4 755 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 ANAPC2Q9UJX6 822 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 SPTAN1Q13813 2472 aaKnown RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 PCSK5Q92824 1860 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 C5orf60A6NFR6 353 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 IFNB1P01574 187 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 PDGFAP04085 211 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 FOLR1P15328 257 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 PBLDP30039 288 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-215ENST00000554656 SPAM1P38567 509 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 MAGEA6P43360 314 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 ITGA8P53708 1063 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 MC1RQ01726 317 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 GPS1Q13098 491 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 DNASE1L3Q13609 305 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 LAMB3Q13751 1172 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 ERV3-1Q14264 604 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 NFE2L1Q14494 772 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 SLC1A5Q15758 541 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHMT2-215ENST00000554656 GPRC6AQ5T6X5 926 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 IZUMO3Q5VZ72 239 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 PWWP2BQ6NUJ5 590 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 HIBCHQ6NVY1 386 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-215ENST00000554656 DUS1LQ6P1R4 473 aaKnown RBP10.33□□□□□ -0.76
SHMT2-215ENST00000554656 MICALCLQ6ZW33 695 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 ZC3H18Q86VM9 953 aaKnown RBP10.33□□□□□ -0.76
SHMT2-215ENST00000554656 RELL1Q8IUW5 271 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 RASGRP3Q8IV61 690 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 RBM12BQ8IXT5 1001 aaKnown RBP10.33□□□□□ -0.76
SHMT2-215ENST00000554656 PPIL6Q8IXY8 311 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 DDHD1Q8NEL9 900 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 IPMKQ8NFU5 416 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 GDAP1Q8TB36 358 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 STAMBPL1Q96FJ0 436 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 TXLNGYQ9BZA5 131 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 TRABDQ9H4I3 376 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 C10orf88Q9H8K7 445 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 FAM53CQ9NYF3 392 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 LNPEPQ9UIQ6 1025 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 PSMD13Q9UNM6 376 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 PLAAQ9Y263 795 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 KCTD3Q9Y597 815 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 PCDHGA6Q9Y5G7 932 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 CFAP20Q9Y6A4 193 aaKnown RBP10.33□□□□□ -0.76
SHMT2-215ENST00000554656 SHANK1Q9Y566 2161 aa10.33□□□□□ -0.76
SHMT2-215ENST00000554656 GLYATL1P3A0A0U1RQE8 302 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 OR2AG2A6NM03 316 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 TP73O15350 636 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 EIF3HO15372 352 aaKnown RBP eCLIP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 KCNN4O15554 427 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 SGTAO43765 313 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 KATNA1O75449 491 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 SNRNP200O75643 2136 aaKnown RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 POP7O75817 140 aaKnown RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 SASH3O75995 380 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 FAM153BP0C7A2 387 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 EBLN1P0CF75 366 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 RBL1P28749 1068 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 RPL22P35268 128 aaKnown RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 FDFT1P37268 417 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 RPS18P62269 152 aaKnown RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 TUBB3Q13509 450 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 OLIG2Q13516 323 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 GTF2H3Q13889 308 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 FAM153CQ494X1 144 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 RNASEH2BQ5TBB1 312 aaKnown RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 TMEM220Q6QAJ8 160 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 LRIG3Q6UXM1 1119 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 PPP1R21Q6ZMI0 780 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 TRMT10CQ7L0Y3 403 aaKnown RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 GLT6D1Q7Z4J2 308 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 AMZ2Q86W34 360 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 PPP1R3BQ86XI6 285 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 LILRA3Q8N6C8 439 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 BEND7Q8N7W2 519 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 FAM71DQ8N9W8 422 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 SPDYE1Q8NFV5 336 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-215ENST00000554656 DTX3LQ8TDB6 740 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 BLOC1S5Q8TDH9 187 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 ZDHHC12Q96GR4 267 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 PPM1MQ96MI6 270 aa10.32□□□□□ -0.76
SHMT2-215ENST00000554656 FCRL5Q96RD9 977 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms