RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 EPHA6Q9UF33 1036 aa10.39□□□□□ -0.75
SHMT2-213ENST00000554600 ASIC3Q9UHC3 531 aa10.39□□□□□ -0.75
SHMT2-213ENST00000554600 ACSL6Q9UKU0 697 aa10.39□□□□□ -0.75
SHMT2-213ENST00000554600 PYCARDQ9ULZ3 195 aa10.39□□□□□ -0.75
SHMT2-213ENST00000554600 SOX13Q9UN79 622 aa10.39□□□□□ -0.75
SHMT2-213ENST00000554600 ASF1AQ9Y294 204 aa10.39□□□□□ -0.75
SHMT2-213ENST00000554600 TDRKHQ9Y2W6 561 aaKnown RBP10.39□□□□□ -0.75
SHMT2-213ENST00000554600 PCDHGA3Q9Y5H0 932 aa10.39□□□□□ -0.75
SHMT2-213ENST00000554600 MDC1Q14676 2089 aaKnown RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 IGHV5-51A0A0C4DH38 117 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 TEX51A0A1B0GUA7 166 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 GOLGA8KD6RF30 607 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 GOLGA8TH3BQL2 631 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 CES2O00748 559 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 PRMT5O14744 637 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 RAD1O60671 282 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 TMEM63AO94886 807 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 PAMP19021 973 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 CD151P48509 253 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 FNTAP49354 379 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 EIF3BP55884 814 aaKnown RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 SH3BP2P78314 561 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 HSPA14Q0VDF9 509 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 TMED2Q15363 201 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 TAF1BQ53T94 588 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 XKR5Q6UX68 686 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 PRSS42Q7Z5A4 293 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 SDCCAG8Q86SQ7 713 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 CACNA2D3Q8IZS8 1091 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 KRT222Q8N1A0 295 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 MPP5Q8N3R9 675 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 ZSCAN1Q8NBB4 408 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 CFAP61Q8NHU2 1237 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 GSDMBQ8TAX9 411 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 CPT1BQ92523 772 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 UBXN4Q92575 508 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 ZNF669Q96BR6 464 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 MFSD3Q96ES6 412 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 NAPGQ99747 312 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 ZPBPQ9BS86 351 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 KIFC1Q9BW19 673 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 RAB33BQ9H082 229 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 TRIT1Q9H3H1 467 aaKnown RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 ZNF768Q9H5H4 540 aaKnown RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 MRM3Q9HC36 420 aaKnown RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 XAB2Q9HCS7 855 aaKnown RBP10.38□□□□□ -0.75
SHMT2-213ENST00000554600 TREX1Q9NSU2 369 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 MAD1L1Q9Y6D9 718 aa10.38□□□□□ -0.75
SHMT2-213ENST00000554600 FER1L5A0AVI2 2057 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 CTAGE9A4FU28 777 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 TLCD2A6NGC4 264 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 SDR42E2A6NKP2 422 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 IQCF5A8MTL0 148 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 PFDN6O15212 129 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 STK17BO94768 372 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 APOA4P06727 396 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 NELFEP18615 380 aaKnown RBP10.37□□□□□ -0.75
SHMT2-213ENST00000554600 CDH3P22223 829 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 PLOD1Q02809 727 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-213ENST00000554600 TUBB3Q13509 450 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 KCNAB1Q14722 419 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 KIAA1614Q5VZ46 1190 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 MRNIPQ6NTE8 343 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 FBXO38Q6PIJ6 1188 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 CAND1Q86VP6 1230 aaKnown RBP10.37□□□□□ -0.75
SHMT2-213ENST00000554600 HOOK3Q86VS8 718 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 DTX1Q86Y01 620 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 KLHL7Q8IXQ5 586 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 PPIL6Q8IXY8 311 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 OR52E1Q8NGJ3 308 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 OR5AR1Q8NGP9 310 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 SKA2Q8WVK7 121 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-213ENST00000554600 ASZ1Q8WWH4 475 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 NKD1Q969G9 470 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 SGSM3Q96HU1 749 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 UBL7Q96S82 380 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-213ENST00000554600 CD180Q99467 661 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 CARD6Q9BX69 1037 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 ULBP3Q9BZM4 244 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 XKR8Q9H6D3 395 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 PDE7BQ9NP56 450 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 SIDT1Q9NXL6 827 aaKnown RBP10.37□□□□□ -0.75
SHMT2-213ENST00000554600 LNPEPQ9UIQ6 1025 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 GNPTGQ9UJJ9 305 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 TSR3Q9UJK0 312 aaKnown RBP10.37□□□□□ -0.75
SHMT2-213ENST00000554600 SAR1BQ9Y6B6 198 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 SPTA1P02549 2419 aa10.37□□□□□ -0.75
SHMT2-213ENST00000554600 SLC5A10A0PJK1 596 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 K7ENP7 123 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 MATN2O00339 956 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 EFSO43281 561 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 MAP3K7O43318 606 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 KDM1AO60341 852 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 EBLN1P0CF75 366 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 MLNP12872 115 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 FMO4P31512 558 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 PAFAH1B1P43034 410 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 MAGEA6P43360 314 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms